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Citing CMDGA
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Annotation type
5
accessible chromatin
3
target gene predictions
2
variant allelic effects
1
candidate regulatory elements
1
chromatin state
1
gene expression
Annotation Category
3
Target gene links
Annotation type Category
2
ATAC-seq
1
ChIP-seq
1
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
17
adrenal gland
14
kidney
10
right kidney
9
left kidney
9
renal cortex interstitium
9
renal pelvis
2
cortical cell of adrenal gland
2
kidney tubule cell
2
left renal cortex interstitium
2
left renal pelvis
2
right renal cortex interstitium
2
right renal pelvis
1
ACHN
1
Caki2
1
G401
1
HEK293
1
HEK293T
1
RCC 7860
1
epithelial cell of proximal tubule
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
renal cell carcinoma
1
renal cortical epithelial cell
1
type I cell of adrenal cortex
1
type II cell of adrenal cortex
Organ
3
epithelium
2
adrenal gland
1
kidney
Life stage
1
unknown
Date released
2
November, 2021
1
September, 2022
Software used
2
abc
1
r
Lab
2
Bing Ren, UCSD
1
AMP-T2D consortium
Project
2
ENCODE
1
AMP
RFA
2
ENCODE3
1
AMP
month_released!
February, 2021
Showing 3 of 3 results
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Download
FileSet
DSR916TGP
released
Annotation file set
: Target gene predictions for BSS01491 renal cortical epithelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR430IHA
released
Annotation file set
: Target gene predictions of Transitional Zone Cortical Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR923ULB
released
Annotation file set
: Target gene predictions of Cortical Epithelial-like from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE