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Schema
Citing CMDGA
Clear Filters
Annotation type
14
candidate regulatory elements
12
chromatin state
8
accessible chromatin
8
target gene predictions
5
binding sites
3
histone modifications
1
eQTL
Annotation Category
8
Target gene links
Annotation type Category
8
DNase-seq
7
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
8
bed bed3+
File set status
8
released
Genome assembly (visualization)
8
hg19
Organism
8
Homo sapiens
Biosample type
8
tissue
primary cell
Biosample term
55
HeLa-S3
39
H1-hESC
23
K562
21
stomach
19
A549
19
HFFc6
19
heart
16
adrenal gland
16
brain
16
lung
16
muscle of arm
16
small intestine
15
placenta
14
kidney
14
large intestine
14
muscle of leg
13
left lung
13
muscle of back
13
thymus
11
right lung
10
hematopoietic multipotent progenitor cell
10
pituitary stalk
10
right kidney
9
left kidney
9
renal cortex interstitium
9
renal pelvis
8
GM12878
8
H9
8
liver
8
spinal cord
7
adipose tissue
7
lymphocyte
7
spleen
6
MCF-7
6
adipocyte
6
dendritic cell
6
sigmoid colon
5
body of pancreas
5
gastrocnemius medialis
5
heart left ventricle
5
muscle of trunk
5
ovary
5
psoas muscle
5
thyroid gland
5
transverse colon
4
CyT49
4
HUES8
4
chorionic villus
4
endocrine pancreas
4
iPSC derived cell line
4
neural progenitor cell
3
HCT116
3
Peyer's patch
3
SK-N-SH
3
breast epithelium
3
caudate nucleus
3
chorion membrane
3
coronary artery
3
endometrium adenocarcinoma
3
heart right ventricle
3
immortal human breast epithelial cell line cell
3
layer of hippocampus
3
mesenchymal stem cell
3
pancreas
3
retina
3
skeletal muscle tissue
3
testis
3
tibial nerve
3
upper lobe of left lung
2
22Rv1
2
A673
2
BJAB cell
2
Brodmann (1909) area 46
2
GM18507
2
GM19238
2
GM19239
2
GM19240
2
H7-hESC
2
HAP-1
2
HT-29
2
HepG2
2
IMR-90
2
Jurkat
2
KARPAS-422 cell
2
LNCaP clone FGC
2
LoVo cell
2
MCF 10A cell
2
MM.1S
2
NAMALWA cell
2
OCI-LY7
2
PC-9
2
Panc1
2
SK-N-DZ
2
T47D
2
THP-1
2
U937
2
angular gyrus
2
aorta
2
ascending aorta
2
bipolar neuron
2
cerebellum
2
cingulate gyrus
2
colonic mucosa
2
duodenal mucosa
2
endodermal cell
2
esophagus
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
eye
2
frontal cortex
2
iPS DF 19.11
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
lower leg skin
2
mesendoderm
2
mucosa of rectum
2
muscle cell
2
muscle layer of colon
2
muscle layer of duodenum
2
omental fat pad
2
parathyroid adenoma
2
prostate gland
2
right atrium auricular region
2
right renal cortex interstitium
2
right renal pelvis
2
stomach smooth muscle
2
substantia nigra
2
temporal lobe
2
thoracic aorta
2
tibial artery
2
tongue
2
trophoblast
2
trophoblast cell
2
urinary bladder
2
uterus
2
vagina
1
8988T
1
A172
1
ACC112
1
ACHN
1
AG04449 cell
1
AG04450 cell
1
AG08395 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
AG20443
1
Ammon's horn
1
BE(2)-C
1
BJ cell
1
C4-2B
1
CMK
1
COLO829
1
CWRU1
1
Caco-2 cell
1
Caki2
1
DND-41
1
DOHH2
1
Daoy
1
EH
1
EL
1
ELF-1
1
ELR
1
ES-I3
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
G401
1
GM03348
1
GM04503
1
GM04504
1
GM06990
1
GM08714
1
GM10248
1
GM10266
1
GM12864
1
GM12865
1
GM12875
1
GM12891
1
GM12892
1
GM18486
1
GM18505
1
GM18508
1
GM18516
1
GM18522
1
GM19099
1
GM19141
1
GM19193
1
GM19204
1
GM23248
1
GM23338
1
H4
1
H54
1
HCT-116 cell
1
HEK293
1
HEK293T
1
HK-2 cell
1
HL-60
1
HPDE6-E6E7
Organ
8
spinal cord
Life stage
7
embryonic
Date released
7
September, 2022
March, 2020
1
May, 2021
Software used
7
r
1
abc
Lab
7
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
8
AMP
RFA
8
AMP
biosample_type!
primary cell
month_released!
March, 2020
Showing 8 of 8 results
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Download
FileSet
DSR171AZH
released
Annotation file set
: Target gene predictions for BSS01621 spinal cord from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR475KWK
released
Annotation file set
: Target gene predictions for BSS01620 spinal cord from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR097WHN
released
Annotation file set
: Target gene predictions for BSS01619 spinal cord from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR592RRZ
released
Annotation file set
: Target gene predictions for BSS01618 spinal cord from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR904OYQ
released
Annotation file set
: Target gene predictions for BSS01617 spinal cord from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR321VVT
released
Annotation file set
: Target gene predictions for BSS01614 spinal cord from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR812QPD
released
Annotation file set
: Target gene predictions for BSS01613 spinal cord from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR524YND
released
Annotation file set
: enhancer-gene predicton of spinal_cord_fetal-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP