Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
15
histone modifications
13
accessible chromatin
10
gene expression
4
binding sites
3
Fine-mapped variants
3
target gene predictions
2
candidate regulatory elements
2
chromatin state
2
eQTL
1
variant allelic effects
Annotation Category
3
Target gene links
Annotation type Category
2
ChIP-seq
2
DNase-seq
1
pCHi-C
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
primary cell
2
tissue
1
in vitro differentiated cells
Biosample term
55
HeLa-S3
38
H1-hESC
23
K562
19
A549
19
HFFc6
10
hematopoietic multipotent progenitor cell
10
pituitary stalk
9
adrenal gland
8
GM12878
8
adipose tissue
8
liver
8
psoas muscle
8
stomach
7
H9
7
lymphocyte
7
sigmoid colon
7
spleen
6
MCF-7
6
adipocyte
6
dendritic cell
5
body of pancreas
5
gastrocnemius medialis
5
heart left ventricle
5
ovary
5
pancreas
5
small intestine
5
thyroid gland
5
transverse colon
4
CyT49
4
HUES8
4
aorta
4
endocrine pancreas
4
heart right ventricle
4
iPSC derived cell line
4
thymus
3
HCT116
3
HepG2
3
Peyer's patch
3
SK-N-SH
3
breast epithelium
3
cardiomyocytes (cardiac muscle cell)
3
caudate nucleus
3
coronary artery
3
endometrium adenocarcinoma
3
esophagus
3
heart
3
immortal human breast epithelial cell line cell
3
layer of hippocampus
3
lung
3
mesenchymal stem cell
3
skeletal muscle tissue
3
tibial nerve
3
upper lobe of left lung
2
22Rv1
2
A673
2
Ammon's horn
2
BJAB cell
2
Brodmann (1909) area 46
2
GM18507
2
GM19238
2
GM19239
2
GM19240
2
HAP-1
2
HT-29
2
Jurkat
2
KARPAS-422 cell
2
LNCaP clone FGC
2
LoVo cell
2
MCF 10A cell
2
MM.1S
2
NAMALWA cell
2
OCI-LY7
2
PC-9
2
Panc1
2
SK-N-DZ
2
T47D
2
THP-1
2
U937
2
angular gyrus
2
ascending aorta
2
bipolar neuron
2
cerebellum
2
cingulate gyrus
2
colonic mucosa
2
duodenal mucosa
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
frontal cortex
2
iPS DF 19.11
2
kidney
2
lower leg skin
2
lymphocyte of B lineage (iPSC)
2
mesendoderm
2
mucosa of rectum
2
muscle cell
2
muscle layer of colon
2
muscle layer of duodenum
2
omental fat pad
2
parathyroid adenoma
2
prostate gland
2
right atrium auricular region
2
right cardiac atrium
2
stomach smooth muscle
2
substantia nigra
2
temporal lobe
2
testis
2
thoracic aorta
2
tibial artery
2
uterus
2
vagina
1
8988T
1
A172
1
ACC112
1
ACHN
1
AG08395 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
AG20443
1
B-lymphoblastoid cell line
1
BE(2)-C
1
BJ cell
1
C4-2B
1
CMK
1
COLO829
1
CWRU1
1
Caco-2 cell
1
Caki2
1
DND-41
1
DOHH2
1
Daoy
1
EH
1
EL
1
ELR
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
EndoC_BH1
1
G401
1
GM03348
1
GM04503
1
GM04504
1
GM06990
1
GM08714
1
GM10248
1
GM10266
1
GM12864
1
GM12865
1
GM12875
1
GM12891
1
GM12892
1
GM18486
1
GM18505
1
GM18508
1
GM18516
1
GM18522
1
GM19099
1
GM19141
1
GM19193
1
GM19204
1
GM23248
1
GM23338
1
H4
1
H54
1
H7-hESC
1
HCT-116 cell
1
HK-2 cell
1
HL-60
1
HPDE6-E6E7
1
HS-27A
1
HS-5
1
HT1080
1
HuH-7
1
HuH-7.5
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
IMR-90
1
KBM-7
1
KMS-11
1
KOPT-K1
1
L1-S8
1
L1-S8R
1
LHCN-M2
1
LNCAP
1
Loucy
1
M059J
1
MDA-MB-231 cell
1
MG63
1
NB4
1
NCCIT cell
1
NCI-H226 cell
1
NCI-H460 cell
1
NCI-H929
1
NT2-D1 cell
1
OCI-LY1
1
OCI-LY3
1
PC-3
1
RCC 7860
1
RPMI7951
1
RPMI8226
Organ
2
brain
Life stage
embryonic
2
adult
Date released
2
September, 2022
1
March, 2020
Software used
2
r
1
nospecificsoft_customcode
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_type!
primary cell
relevant_life_stage!
embryonic
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR540WDY
released
Annotation file set
: Target gene predictions for BSS00371 frontal cortex from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR897QIE
released
Annotation file set
: Target gene predictions for BSS00369 frontal cortex from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR727XIO
released
Annotation file set
: A target gene prediction annotation in Human Neural Prgenitor Cell of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP