Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
6
candidate regulatory elements
5
chromatin state
4
target gene predictions
2
accessible chromatin
2
binding sites
1
variant allelic effects
Annotation Category
4
Target gene links
Annotation type Category
3
DNase-seq
2
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
1
HiC
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
17
small intestine
14
large intestine
7
sigmoid colon
5
transverse colon
4
aorta
4
colon epithelial cell
4
endothelial cell of umbilical vein
3
HCT116
3
Peyer's patch
3
coronary artery
2
HT-29
2
ascending aorta
2
colonic mucosa
2
dermis blood vessel endothelial cell
2
duodenal mucosa
2
enteric smooth muscle cell
2
mucosa of rectum
2
muscle layer of colon
2
muscle layer of duodenum
2
thoracic aorta
2
tibial artery
1
HCT-116 cell
1
SW480
1
brain microvascular endothelial cell
1
enterocyte of epithelium of small intestine
1
fibroblast of pulmonary artery
1
fibroblast of the aortic adventitia
1
kidney capillary endothelial cell
1
paneth cell
1
pulmonary artery endothelial cell
1
rectum smooth muscle tissue
1
small intestine goblet cell
1
smooth muscle cell of the coronary artery
Organ
4
blood vessel
4
epithelium
4
vasculature
4
vein
0
intestine
Life stage
2
newborn
Date released
2
September, 2022
1
March, 2020
1
May, 2021
Software used
2
r
1
abc
1
hiccups
Lab
3
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
4
AMP
RFA
4
AMP
month_released!
March, 2024
Showing 4 of 4 results
table-tab-icon
matrix-icon
Download
FileSet
DSR936NVU
released
Annotation file set
: Target gene predictions for BSS00298 endothelial cell of umbilical vein from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR099GIV
released
Annotation file set
: Target gene predictions for BSS00296 endothelial cell of umbilical vein from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR784TGC
released
Annotation file set
: enhancer-gene predicton of endothelial_cell_of_umbilical_vein-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR049KAF
released
Annotation file set
: A target gene prediction annotation in endothelial cell of umbilical vein of DSR430XOJ Hi-C
Lab:
AMP-T2D consortium
Project:
AMP