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Schema
Citing CMDGA
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Annotation type
5
candidate regulatory elements
5
target gene predictions
4
chromatin state
2
accessible chromatin
2
variant allelic effects
Annotation Category
5
Target gene links
Annotation type Category
4
ChIP-seq
4
DNase-seq
1
ATAC-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
19
CD14-positive monocyte
14
common myeloid progenitor, CD34-positive
10
B cell
10
pericyte cell
9
CD4-positive, alpha-beta memory T cell
7
CD8-positive, alpha-beta memory T cell
7
endothelial cell
6
mononuclear cell
6
olfactory receptor cell
6
smooth muscle cell
5
CD8-positive, alpha-beta T cell
5
keratinocyte
5
natural killer cell
5
trophoblast cell
4
T cell
4
astrocyte
4
endothelial cell of umbilical vein
4
fibroblast
4
fibroblast of cardiac tissue
4
fibroblast of dermis
4
fibroblast of lung
4
foreskin keratinocyte
4
mammary gland epithelial cell
4
pancreatic delta cell
4
regulatory T cell
3
CD4-positive, alpha-beta T cell
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
colon epithelial cell
3
epithelial cell of prostate
3
hepatocyte
3
luminal epithelial cell of mammary gland
3
macrophage
3
naive T cell
3
neurosphere
3
neutrophil
3
pancreatic A cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic ductal cell
3
skin fibroblast
3
type B pancreatic cell
2
CD4-positive helper T cell
2
T-cell
2
activated CD4-positive, alpha-beta T cell
2
blood vessel smooth muscle cell
2
bronchial epithelial cell
2
cortical cell of adrenal gland
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
enteric smooth muscle cell
2
erythroblast
2
fibroblast of breast
2
foreskin fibroblast
2
gabaergic neuron
2
glutamatergic neuron
2
kidney tubule cell
2
megakaryocyte
2
memory B cell
2
monocyte
2
myoepithelial cell of mammary gland
2
naive B cell
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
osteoblast
2
skeletal muscle myoblast
2
skeletal muscle satellite cell
2
smooth muscle cell of the esophagus
2
type II pneumocyte
1
B cell, CD19-positive
1
CD1c-positive myeloid dendritic cell
1
CD56-positive, CD161-positive immature natural killer cell
1
activated CD8-positive, alpha-beta T cell
1
adult endothelial progenitor cell
1
alternatively activated macrophage
1
alveolar macrophage
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
astrocyte of the spinal cord
1
basal cell
1
basal cell of epidermis
1
brain microvascular endothelial cell
1
cardiac endothelial cell
1
cardiac muscle cell
1
cell
1
choroid plexus epithelial cell
1
ciliated cell
1
club cell
1
colon goblet cell
1
conventional dendritic cell
1
eccrine cell
1
endocardial cell
1
endothelial cell of lymphatic vessel
1
enteric neuron
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
epidermal melanocyte
1
epithelial cell of amnion
1
epithelial cell of esophagus
1
epithelial cell of proximal tubule
1
fat cell
1
fibroblast of arm
1
fibroblast of gingiva
1
fibroblast of mammary gland
1
fibroblast of peridontal ligament
1
fibroblast of pulmonary artery
1
fibroblast of the aortic adventitia
1
fibroblast of the conjunctiva
1
fibroblast of villous mesenchyme
1
foreskin melanocyte
1
foveolar cell of stomach
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
granular cell of epidermis
1
hepatic stellate cell
1
inflammatory macrophage
1
intestinal tuft cell
1
iris pigment epithelial cell
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
lung microvascular endothelial cell
1
luteal cell
1
mammary epithelial cell
1
mammary stem cell
1
mast cell
1
mature NK T cell
1
megakaryocyte-erythroid progenitor cell
1
melanocyte
1
mesothelial cell
1
microglial cell
1
myoepithelial cell
1
naive t cell
1
natural killer cell mediated cytotoxicity
1
non keratinizing barrier epithelial cell
1
non-classical monocyte
1
non-pigmented ciliary epithelial cell
1
oligodendrocyte
1
oligodendrocyte precursor cell
1
pancreatic polypeptide-secreting cell
1
pancreatic stellate cell
1
paneth cell
1
parietal cell
1
peptic cell
1
plasma cell
1
plasmacytoid dendritic cell
1
pulmonary artery endothelial cell
1
regular atrial cardiac myocyte
1
regular cardiac myocyte
1
renal cortical epithelial cell
1
respiratory goblet cell
1
retinal pigment epithelial cell
1
schwann cell
1
skeletal muscle cell
1
skeletal muscle fibroblast
1
small intestine goblet cell
1
smooth muscle cell of the brain vasculature
1
smooth muscle cell of the coronary artery
1
stellate neuron
1
stomach neuroendocrine cell
1
stromal cell
1
stromal cell of bone marrow
1
thyroid follicular cell
1
type I cell of adrenal cortex
1
type I muscle cell
1
type I pneumocyte
1
type II cell of adrenal cortex
1
type II muscle cell
1
uterine smooth muscle cell
1
ventricular cardiac muscle cell
Organ
4
connective tissue
4
heart
1
epithelium
1
esophagus
Life stage
2
unknown
1
adult
1
embryonic
Date released
4
September, 2022
1
November, 2021
Software used
4
r
1
abc
Lab
4
AMP-T2D consortium
1
Bing Ren, UCSD
Project
4
AMP
1
ENCODE
RFA
4
AMP
1
ENCODE3
organ_slims!
skeleton
Showing 5 of 5 results
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Download
FileSet
DSR005XGT
released
Annotation file set
: Target gene predictions for BSS00307 epithelial cell of esophagus from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR810LVT
released
Annotation file set
: Target gene predictions for BSS00168 fibroblast of cardiac tissue from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR743GKE
released
Annotation file set
: Target gene predictions for BSS00167 fibroblast of cardiac tissue from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR215DPK
released
Annotation file set
: Target gene predictions for BSS00166 fibroblast of cardiac tissue from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR063DIM
released
Annotation file set
: Target gene predictions of Cardiac Fibroblasts from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE