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Schema
Citing CMDGA
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Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
gene expression
1
target gene predictions
1
variant allelic effects
Annotation Category
1
Target gene links
Annotation type Category
1
snATAC-seq
Available data
1
bed bed3+
1
bigBed narrowPeak
1
bigWig
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
10
common myeloid progenitor, CD34-positive
6
B cell
5
CD8-positive, alpha-beta memory T cell
5
mononuclear cell
3
CD14-positive monocyte
3
CD4-positive, alpha-beta memory T cell
3
T cell
3
natural killer cell
2
T-helper 1 cell
2
T-helper 2 cell
2
fibroblast of breast
2
kidney tubule cell
2
mammary gland epithelial cell
2
myoepithelial cell of mammary gland
2
naive T cell
2
regulatory T cell
1
cell
1
dermis blood vessel endothelial cell
1
fibroblast of cardiac tissue
1
fibroblast of dermis
1
fibroblast of lung
1
hepatic stellate cell
1
kidney glomerular epithelial cell
1
luminal epithelial cell of mammary gland
1
mammary stem cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic delta cell
1
skeletal muscle myoblast
1
skeletal muscle satellite cell
Organ
1
epithelium
1
pancreas
Life stage
1
adult
1
unknown
Date released
1
September, 2022
Software used
1
cicero
Lab
1
Kyle Gaulton, UCSD
Project
1
AMP
RFA
1
AMP
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Download
FileSet
DSR236XNZ
released
Annotation file set
: pancreatic delta cell co-accessibility linking chromatin sites to gene promoters annotation from snATAC
Lab:
Kyle Gaulton, UCSD
Project:
AMP