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Schema
Citing CMDGA
Clear Filters
Annotation type
13
gene expression
8
accessible chromatin
4
candidate regulatory elements
4
histone modifications
4
target gene predictions
2
chromatin state
2
variant allelic effects
1
binding sites
Annotation Category
4
Target gene links
Annotation type Category
3
DNase-seq
2
ATAC-seq
2
ChIP-seq
1
H3K27ac ChIP-Seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
in vitro differentiated cells
Biosample term
10
liver
4
hepatocyte
3
HepG2
2
megakaryocyte
1
HS-27A
1
HS-5
1
HuH-7
1
HuH-7.5
1
KMS-11
1
L1-S8
1
L1-S8R
1
MG63
1
NCI-H929
1
OCI-LY1
1
OCI-LY3
1
SJSA1
1
arm bone
1
femur
1
hepatic stellate cell
1
leg bone
1
right lobe of liver
1
stromal cell of bone marrow
Organ
4
epithelium
4
liver
0
bone element
Life stage
1
embryonic
1
unknown
Date released
2
September, 2022
1
May, 2021
1
November, 2021
Software used
2
abc
2
r
Lab
2
AMP-T2D consortium
1
Bing Ren, UCSD
1
Jesse Engreitz, Stanford University
Project
3
AMP
1
ENCODE
RFA
3
AMP
1
ENCODE3
files.file_type!
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Showing 4 of 4 results
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FileSet
DSR926ULW
released
Annotation file set
: Target gene predictions for BSS00556 hepatocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR361WHM
released
Annotation file set
: Target gene predictions for BSS00554 hepatocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR943ZIF
released
Annotation file set
: Target gene predictions of Hepatocyte from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR604IOP
released
Annotation file set
: enhancer-gene predicton of hepatocyte-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP