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Citing CMDGA
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Annotation type
5
target gene predictions
3
candidate regulatory elements
2
chromatin state
1
accessible chromatin
1
binding sites
1
histone modifications
Annotation Category
5
Target gene links
Annotation type Category
3
DNase-seq
2
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
1
HiC
1
pCHi-C
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
5
in vitro differentiated cells
1
stem cell
Biosample term
10
hematopoietic multipotent progenitor cell
6
adipocyte
6
dendritic cell
5
neural progenitor cell
3
cardiomyocytes (cardiac muscle cell)
3
mesenchymal stem cell
2
bipolar neuron
2
endodermal cell
2
lymphocyte of B lineage (iPSC)
2
mesendoderm
2
muscle cell
2
trophoblast cell
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
cardiac mesoderm primordium
1
cardiac muscle cell
1
cardiac precursors (cardiac muscle cell)
1
ectodermal cell
1
embryonic stem cell
1
hepatocyte
1
islet precursor cell
1
mesodermal cell
1
myotube
1
neural cell
1
neuron
1
neuronal stem cell
1
olfactory neurosphere cell line
1
skeletal muscle myoblast
1
smooth muscle cell
1
white adipose cell
Organ
3
connective tissue
Life stage
3
adult
1
embryonic
Date released
2
September, 2022
1
March, 2020
1
May, 2020
1
May, 2021
Software used
2
r
1
abc
1
chicago
1
hiccups
Lab
4
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
5
AMP
RFA
5
AMP
biosample_term_name!
skeletal muscle tissue
Showing 5 of 5 results
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Download
FileSet
DSR607MNF
released
Annotation file set
: Target gene predictions for BSS01261 mesenchymal stem cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR391CWH
released
Annotation file set
: Target gene predictions for BSS01260 mesenchymal stem cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR170XIW
released
Annotation file set
: enhancer-gene predicton of H1_Derived_Mesenchymal_Stem_Cells-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR360EAO
released
Annotation file set
: A target gene prediction annotation in lymphocyte of B lineage (iPSC) of DSR763JZB Hi-C E-MTAB-6014
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR991ZOB
released
Annotation file set
: A target gene prediction annotation in lymphocyte of B lineage (iPSC) of DSR535XNG pCHi-C E-MTAB-6014
Lab:
AMP-T2D consortium
Project:
AMP