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Schema
Citing CMDGA
Clear Filters
Annotation type
9
accessible chromatin
5
gene expression
4
target gene predictions
3
differential activity
2
variant allelic effects
1
histone modifications
Annotation Category
4
Target gene links
Annotation type Category
2
ATAC-seq
2
snATAC-seq
1
DNase-seq
1
H3K27ac ChIP-Seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
6
ovary
5
body of pancreas
5
pancreas
4
endocrine pancreas
4
pancreatic delta cell
3
pancreatic A cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic ductal cell
3
testis
3
type B pancreatic cell
2
Panc1
1
8988T
1
EndoC_BH1
1
HPDE6-E6E7
1
NT2-D1 cell
1
islet of Langerhans
1
luteal cell
1
pancreatic polypeptide-secreting cell
1
pancreatic stellate cell
Organ
4
epithelium
4
pancreas
0
gonad
Date released
2
January, 2021
1
May, 2021
1
November, 2021
Software used
2
abc
2
cicero
Lab
2
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
1
Jesse Engreitz, Stanford University
Project
2
T1D
1
AMP
1
ENCODE
RFA
2
T1D
1
AMP
1
ENCODE3
Showing 4 of 4 results
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Download
FileSet
DSR410PLO
released
Annotation file set
: Target gene predictions of Pancreatic Acinar Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR328CUT
released
Annotation file set
: enhancer-gene predicton of pancreatic-acinar-cell-AMP from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR056HMW
released
Annotation file set
: coaccessible target genes annotation from snATAC-seq of gamma
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR521RYC
released
Annotation file set
: coaccessible target genes annotation from snATAC-seq of acinar
Lab:
Kyle Gaulton, UCSD
Project:
T1D