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Citing CMDGA
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Annotation type
5
candidate regulatory elements
5
chromatin state
5
target gene predictions
2
accessible chromatin
1
eQTL
Annotation Category
5
Target gene links
Annotation type Category
2
ATAC-seq
2
DNase-seq
2
H3K27ac ChIP-Seq
2
HiC
1
pCHi-C
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
4
psoas muscle
3
adrenal gland
3
liver
3
pancreas
3
thymus
2
adipose tissue
2
aorta
2
heart left ventricle
2
heart right ventricle
2
ovary
2
sigmoid colon
2
small intestine
2
spleen
2
stomach
1
Ammon's horn
1
beige adipocyte
1
bladder (urinary bladder)
1
body of pancreas
1
breast epithelium
1
cardiac ventricle
1
coronary artery
1
dorsolateral prefrontal cortex
1
esophagus
1
gastric (mucosa of stomach)
1
gastrocnemius medialis
1
heart
1
islet of Langerhans
1
large intestine
1
lung
1
muscle of leg
1
muscle of trunk
1
placenta
1
right cardiac atrium
1
spinal cord
1
thyroid gland
1
transverse colon
1
trophoblast
1
uterus
1
white adipose tissue
Organ
4
musculature of body
1
uterus
Life stage
1
adult
1
child
Date released
3
March, 2020
2
May, 2021
Software used
r
2
abc
2
hiccups
1
nospecificsoft_customcode
Lab
3
AMP-T2D consortium
2
Jesse Engreitz, Stanford University
Project
5
AMP
RFA
5
AMP
organ_slims!
kidney
software_used.software.name!
r
Showing 5 of 5 results
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FileSet
DSR254PVY
released
Annotation file set
: enhancer-gene predicton of uterus-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR593OAU
released
Annotation file set
: enhancer-gene predicton of psoas_muscle-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR735RYC
released
Annotation file set
: A target gene prediction annotation in psoas muscle of DSR656CHU Hi-C for child
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR694YUN
released
Annotation file set
: A target gene prediction annotation in psoas muscle of DSR492BLD Hi-C
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR697CGG
released
Annotation file set
: A target gene prediction annotation in Human Psoas of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP