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Schema
Citing CMDGA
Clear Filters
Annotation type
5
candidate regulatory elements
2
target gene predictions
1
accessible chromatin
Annotation Category
2
Target gene links
Annotation type Category
1
ATAC-seq
1
DNase-seq
1
H3K27ac ChIP-Seq
1
pCHi-C
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
3
colon epithelial cell
HCT116
2
sigmoid colon
1
HCT-116 cell
1
HT-29
1
large intestine
1
transverse colon
Organ
2
intestine
2
large intestine
Date released
September, 2022
1
March, 2020
1
May, 2021
Software used
1
abc
1
nospecificsoft_customcode
Lab
1
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
2
AMP
RFA
2
AMP
biosample_term_name!
HCT116
month_released!
September, 2022
month_released!!
September, 2022
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FileSet
DSR284ZHE
released
Annotation file set
: enhancer-gene predicton of sigmoid_colon-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR074OIQ
released
Annotation file set
: A target gene prediction annotation in Human Sigmoid Colon of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP