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Schema
Citing CMDGA
Clear Filters
Annotation type
11
accessible chromatin
9
gene expression
8
binding sites
6
Fine-mapped variants
6
candidate regulatory elements
6
eQTL
5
histone modifications
4
target gene predictions
4
variant allelic effects
2
caQTL
2
chromatin state
2
differential activity
Annotation Category
4
Target gene links
Annotation type Category
4
ATAC-seq
3
DNase-seq
3
H3K27ac ChIP-Seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
cell line
2
primary cell
2
tissue
Biosample term
1
coronary artery
1
smooth muscle cell of the coronary artery
1
uterine smooth muscle cell
1
uterus
Organ
72
epithelium
38
connective tissue
28
pancreas
14
intestine
13
heart
11
musculature of body
9
skin of body
7
adrenal gland
7
large intestine
7
stomach
7
vasculature
6
blood vessel
5
adipose tissue
5
brain
5
liver
5
lung
4
mammary gland
4
small intestine
3
embryo
3
esophagus
3
extraembryonic component
3
gonad
3
limb
3
ovary
3
thymus
2
artery
2
bone element
2
bone marrow
2
spleen
2
thyroid gland
2
uterus
2
vein
1
breast
1
bronchus
1
lymphatic vessel
1
penis
1
placenta
1
prostate gland
1
spinal cord
1
urinary bladder
Date released
September, 2022
3
May, 2021
1
November, 2021
Software used
4
abc
Lab
3
Jesse Engreitz, Stanford University
1
Bing Ren, UCSD
Project
3
AMP
1
ENCODE
RFA
3
AMP
1
ENCODE3
biosample_type!
cell line
month_released!
September, 2022
Showing 4 of 4 results
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Download
FileSet
DSR838KCD
released
Annotation file set
: Target gene predictions of Smooth Muscle (Uterine) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR254PVY
released
Annotation file set
: enhancer-gene predicton of uterus-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR886XYE
released
Annotation file set
: enhancer-gene predicton of coronary_artery_smooth_muscle_cell-Miller2016 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR233ZIX
released
Annotation file set
: enhancer-gene predicton of coronary_artery-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP