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Citing CMDGA
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Annotation type
2
target gene predictions
1
accessible chromatin
1
variant allelic effects
Annotation Category
2
Target gene links
Annotation type Category
2
ATAC-seq
1
DNase-seq
1
H3K27ac ChIP-Seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
52
tissue
2
primary cell
1
cell line
Biosample term
1
fibroblast of arm
1
thyroid follicular cell
Organ
114
epithelium
50
connective tissue
26
skin of body
24
pancreas
18
vasculature
12
blood vessel
11
mammary gland
9
extraembryonic component
9
kidney
8
heart
8
intestine
8
lung
7
penis
5
embryo
5
musculature of body
4
adrenal gland
4
brain
4
liver
4
stomach
4
vein
3
artery
3
bone element
3
bone marrow
3
bronchus
3
esophagus
3
eye
3
large intestine
3
lymphatic vessel
3
prostate gland
2
small intestine
1
gonad
1
limb
1
mouth
1
ovary
1
placenta
1
spinal cord
1
thyroid gland
1
uterus
Date released
1
May, 2021
1
November, 2021
Software used
2
abc
Lab
1
Bing Ren, UCSD
1
Jesse Engreitz, Stanford University
Project
1
AMP
1
ENCODE
RFA
1
AMP
1
ENCODE3
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Download
FileSet
DSR121IWB
released
Annotation file set
: Target gene predictions of Thyroid Follicular Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR252OJH
released
Annotation file set
: enhancer-gene predicton of fibroblast_of_arm-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP