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Schema
Citing CMDGA
Clear Filters
Annotation type
20
candidate regulatory elements
17
accessible chromatin
9
binding sites
7
histone modifications
5
target gene predictions
4
gene expression
1
chromatin state
Annotation Category
5
Target gene links
Annotation type Category
3
pCHi-C
1
ATAC-seq
1
DNase-seq
1
H3K27ac ChIP-Seq
1
snATAC-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
3
tissue
2
primary cell
Biosample term
3
thymus
2
megakaryocyte
Organ
73
epithelium
57
embryo
54
uterus
38
connective tissue
32
blood
32
bodily fluid
30
pancreas
18
intestine
16
brain
13
heart
12
musculature of body
11
large intestine
10
pituitary gland
10
skin of body
8
lung
7
adrenal gland
7
liver
7
stomach
7
vasculature
6
blood vessel
5
adipose tissue
5
mammary gland
4
small intestine
3
esophagus
3
extraembryonic component
3
gonad
3
limb
3
ovary
3
thymus
2
artery
2
bone element
2
bone marrow
2
prostate gland
2
spleen
2
thyroid gland
2
vein
1
breast
1
bronchus
1
lymph node
1
lymphatic vessel
1
lymphoid tissue
1
penis
1
placenta
1
spinal cord
urinary bladder
Date released
September, 2022
2
May, 2020
1
January, 2021
1
March, 2020
1
May, 2021
Software used
2
chicago
1
abc
1
cicero
1
nospecificsoft_customcode
Lab
3
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
1
Kyle Gaulton, UCSD
Project
4
AMP
1
T1D
RFA
4
AMP
1
T1D
month_released!
September, 2022
organ_slims!
urinary bladder
Showing 5 of 5 results
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Download
FileSet
DSR118ZZL
released
Annotation file set
: enhancer-gene predicton of thymus_fetal-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR345BXM
released
Annotation file set
: coaccessible target genes annotation from snATAC-seq of megakaryocyte
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR149GJC
released
Annotation file set
: Target gene predictions annotation of EGAS00001001911 promoter capture Hi-C of thymus
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR992TVD
released
Annotation file set
: Target gene predictions annotation of EGAS00001001911 promoter capture Hi-C of megakaryocyte
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR625WQC
released
Annotation file set
: A target gene prediction annotation in Human Thymus of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP