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Annotation type
3
target gene predictions
2
accessible chromatin
2
binding sites
2
candidate regulatory elements
2
chromatin state
2
histone modifications
Annotation Category
3
Target gene links
Annotation type Category
1
ChIP-seq
1
DNase-seq
1
pCHi-C
1
snATAC-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
2
megakaryocyte
1
stromal cell of bone marrow
Organ
578
blood
343
brain
189
lung
162
kidney
142
intestine
126
heart
122
epithelium
117
skin of body
96
large intestine
89
muscle organ
84
embryo
83
connective tissue
80
musculature of body
68
uterus
64
extraembryonic component
62
pancreas
57
bodily fluid
51
stomach
50
liver
49
limb
46
adrenal gland
42
eye
41
placenta
41
thymus
38
blood vessel
36
mammary gland
36
small intestine
31
bone element
31
vasculature
25
gonad
25
spleen
24
prostate gland
22
thyroid gland
22
ureter
17
adipose tissue
16
ovary
15
spinal cord
13
artery
13
esophagus
11
penis
10
pituitary gland
9
lymph node
9
testis
7
skeleton
6
lymphoid tissue
6
mouth
6
urinary bladder
5
breast
5
vein
4
tongue
4
vagina
3
bone marrow
3
bronchus
3
lymphatic vessel
3
nerve
1
embryonic structure
1
gallbladder
1
nose
Life stage
1
unknown
Date released
1
January, 2021
1
May, 2020
1
September, 2022
Software used
1
chicago
1
cicero
1
r
Lab
2
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Project
2
AMP
1
T1D
Collection Tags
2
T1D
1
BLUEPRINT
1
EpiMap
RFA
2
AMP
1
T1D
Showing 3 of 3 results
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Download
FileSet
DSR928GVV
released
Annotation file set
: Target gene predictions for BSS01661 stromal cell of bone marrow from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR345BXM
released
Annotation file set
: coaccessible target genes annotation from snATAC-seq of megakaryocyte
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR992TVD
released
Annotation file set
: Target gene predictions annotation of EGAS00001001911 promoter capture Hi-C of megakaryocyte
Lab:
AMP-T2D consortium
Project:
AMP