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Annotation type
2635
pQTL
6
candidate regulatory elements
5
chromatin state
5
target gene predictions
3
binding sites
2
accessible chromatin
1
gene expression
1
histone modifications
1
variant allelic effects
Annotation Category
5
Target gene links
Annotation type Category
4
DNase-seq
2
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
1
HiC
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
4
primary cell
1
tissue
Biosample term
4
endothelial cell of umbilical vein
1
posterior vena cava
Organ
578
blood
343
brain
189
lung
162
kidney
142
intestine
126
heart
122
epithelium
117
skin of body
96
large intestine
89
muscle organ
84
embryo
83
connective tissue
80
musculature of body
68
uterus
64
extraembryonic component
62
pancreas
57
bodily fluid
51
stomach
50
liver
49
limb
46
adrenal gland
42
eye
41
placenta
41
thymus
38
blood vessel
36
mammary gland
36
small intestine
31
bone element
31
vasculature
25
gonad
25
spleen
24
prostate gland
22
thyroid gland
22
ureter
17
adipose tissue
16
ovary
15
spinal cord
13
artery
13
esophagus
11
penis
10
pituitary gland
9
lymph node
9
testis
7
skeleton
6
lymphoid tissue
6
mouth
6
urinary bladder
5
breast
5
vein
4
tongue
4
vagina
3
bone marrow
3
bronchus
3
lymphatic vessel
3
nerve
1
embryonic structure
1
gallbladder
1
nose
Life stage
2
newborn
Date released
2
September, 2022
1
July, 2026
1
March, 2020
1
May, 2021
Software used
2
r
1
abc
1
hiccups
Lab
4
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
5
AMP
Collection Tags
2
DGA
2
EpiMap
1
ENCODE-rE2G
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR995929
released
Annotation file set
: Target gene predictions for posterior vena cava (UBERON:0001072) derived from ENCODE-rE2G (ENCSR321IYW).
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR936NVU
released
Annotation file set
: Target gene predictions for BSS00298 endothelial cell of umbilical vein from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR099GIV
released
Annotation file set
: Target gene predictions for BSS00296 endothelial cell of umbilical vein from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR784TGC
released
Annotation file set
: enhancer-gene predicton of endothelial_cell_of_umbilical_vein-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR049KAF
released
Annotation file set
: A target gene prediction annotation in endothelial cell of umbilical vein of DSR430XOJ Hi-C
Lab:
AMP-T2D consortium
Project:
AMP