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Citing CMDGA
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Annotation type
8
target gene predictions
7
candidate regulatory elements
6
chromatin state
4
eQTL
3
gene expression
2
accessible chromatin
2
variant allelic effects
1
binding sites
Annotation Category
2
Genetic variant effects
Annotation type Category
2
ATAC-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
1
in vitro differentiated cells
1
tissue
Biosample term
6
fibroblast
2
cardiac fibroblast
1
omental fat pad
1
Adipose SGBS cell line (adipocyte)
1
Preadipose SGBS cell line (adipocyte)
adipocyte
1
adipose tissue
1
brain pericyte
1
hepatic stellate cell
1
subcutaneous adipose tissue
Organ
2
connective tissue
1
adipose tissue
Date released
2
May, 2020
Software used
2
deltasvm
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
biosample_term_name!
adipocyte
Showing 2 of 2 results
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FileSet
DSR980SZR
released
Annotation file set
: Genetic variants with deltaSVM predictions in preadipose SGBS ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR088HBN
released
Annotation file set
: Genetic variants with deltaSVM predictions in adipose subcutaneous ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP