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Citing CMDGA
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Annotation type
8
candidate regulatory elements
8
gene expression
7
accessible chromatin
7
target gene predictions
4
chromatin state
3
Fine-mapped variants
3
differential activity
2
binding sites
2
histone modifications
2
variant allelic effects
1
eQTL
Annotation Category
2
Genetic variant effects
Annotation type Category
1
DNase-seq
1
snATAC-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
1
primary cell
1
tissue
Biosample term
1
EndoC_BH1
1
body of pancreas
1
islet of Langerhans
1
pancreas
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic delta cell
1
pancreatic ductal cell
1
pancreatic endocrine cell
1
pancreatic polypeptide-secreting cell
Organ
2
pancreas
1
epithelium
Date released
1
February, 2024
1
May, 2020
Software used
2
deltasvm
Lab
1
AMP-T2D consortium
1
Bing Ren, UCSD
Project
2
AMP
RFA
2
AMP
month_released!
January, 2021
Showing 2 of 2 results
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Download
FileSet
DSR515RDR
released
Annotation file set
: Variant allelic effects annotation of Ductal cells from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR993IYU
released
Annotation file set
: Genetic variants with deltaSVM predictions in pancreas body DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP