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Schema
Citing CMDGA
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Annotation type
12
candidate regulatory elements
8
chromatin state
8
target gene predictions
6
Fine-mapped variants
5
accessible chromatin
4
variant allelic effects
3
eQTL
3
gene expression
Annotation Category
4
Genetic variant effects
Annotation type Category
3
DNase-seq
1
ATAC-seq
Available data
3
bed bed3+
File set status
4
released
Genome assembly (visualization)
3
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
2
muscle of leg
2
coronary artery
2
heart
2
heart left ventricle
2
right atrium auricular region
2
tibial artery
2
tibial nerve
1
hindlimb muscle
1
omental fat pad
1
adipose tissue
1
ascending aorta
1
body of pancreas
1
brain
1
caudate nucleus
1
cerebellum (Hemisphere)
1
frontal cortex
1
globus pallidus
1
heart right ventricle
1
islet of Langerhans
1
left cardiac atrium
1
medulla oblongata
1
midbrain
1
middle frontal gyrus
1
muscle of arm
1
occipital lobe
1
pancreas
1
pons
1
putamen
1
retina
1
subcutaneous adipose tissue
1
superior temporal gyrus
1
thoracic aorta
Organ
2
artery
2
blood vessel
2
limb
2
vasculature
1
brain
1
pancreas
Life stage
1
adult
Date released
4
May, 2020
Software used
4
deltasvm
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
organ_slims!
kidney
Showing 4 of 4 results
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Download
FileSet
DSR982FHO
released
Annotation file set
: Variant allelic effects of pons ENCODE DHSseq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR238UZR
released
Annotation file set
: Genetic variants with deltaSVM predictions in tibial artery ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR993IYU
released
Annotation file set
: Genetic variants with deltaSVM predictions in pancreas body DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR283WPA
released
Annotation file set
: Genetic variants with deltaSVM predictions in artery tibial DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP