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Schema
Citing CMDGA
Clear Filters
Annotation type
5
variant allelic effects
4
accessible chromatin
2
candidate regulatory elements
1
binding sites
1
target gene predictions
Annotation Category
5
Genetic variant effects
Annotation type Category
4
snATAC-seq
1
DNase-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
6
fibroblast
3
enterocyte
3
macrophage
3
myofibroblast cell
2
cardiac fibroblast
2
Schwann cell
2
T cell
2
basal cell
2
cardiac muscle cell
2
endothelial cell
2
epithelial cell of esophagus
2
goblet cell
2
hepatocyte
2
skeletal muscle fiber
2
smooth muscle cell
2
vascular associated smooth muscle cell
1
brain microvascular endothelial cell
1
retinal pigment epithelial cell
1
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
Satellite Cells, Skeletal Muscle
1
adipocyte
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain pericyte
1
bronchial goblet cell
choroid plexus epithelial cell
1
cortical cell of adrenal gland
1
endothelial cell of umbilical vein
1
epithelial cell of proximal tubule
1
glomerular endothelial cell
1
granulosa cell
1
hepatic stellate cell
1
keratinocyte
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
luminal epithelial cell of prostatic duct
1
lymphocyte of B lineage
1
mammary gland epithelial cell
1
mast cell
1
mesothelial cell
1
naive t cell
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic delta cell
1
pancreatic ductal cell
1
pancreatic endocrine cell
1
pancreatic polypeptide-secreting cell
1
parietal cell
1
peptic cell
1
renal cortical epithelial cell
1
skeletal muscle cell
1
skeletal muscle myoblast
1
smooth muscle cell of the brain vasculature
1
thyroid follicular cell
1
type II pneumocyte
Organ
3
epithelium
3
intestine
Date released
4
February, 2024
1
May, 2020
Software used
5
deltasvm
Lab
4
Bing Ren, UCSD
1
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
biosample_term_name!
choroid plexus epithelial cell
month_released!
June, 2020
Showing 5 of 5 results
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Download
FileSet
DSR972LVJ
released
Annotation file set
: Variant allelic effects annotation of Enterocytes (sub-type3) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR623GGP
released
Annotation file set
: Variant allelic effects annotation of Enterocytes (sub-type2) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR654PGN
released
Annotation file set
: Variant allelic effects annotation of Enterocytes from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR731EZG
released
Annotation file set
: Variant allelic effects annotation of Cardiomyocytes from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR562MNO
released
Annotation file set
: Genetic variants with deltaSVM predictions in heart cardiac muscle cell DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP