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Schema
Citing CMDGA
Clear Filters
Annotation type
8
accessible chromatin
4
target gene predictions
4
variant allelic effects
3
differential activity
3
gene expression
Annotation Category
4
Genetic variant effects
Annotation type Category
4
snATAC-seq
Available data
4
bed bed3+
1
bigBed narrowPeak
1
bigWig
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
6
fibroblast
3
enterocyte
3
macrophage
3
myofibroblast cell
2
cardiac fibroblast
2
Schwann cell
2
T cell
2
basal cell
2
cardiac muscle cell
2
endothelial cell
2
epithelial cell of esophagus
2
goblet cell
2
hepatocyte
2
skeletal muscle fiber
2
smooth muscle cell
2
vascular associated smooth muscle cell
1
brain microvascular endothelial cell
1
retinal pigment epithelial cell
1
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
Satellite Cells, Skeletal Muscle
1
adipocyte
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain pericyte
1
bronchial goblet cell
1
choroid plexus epithelial cell
1
cortical cell of adrenal gland
1
endothelial cell of umbilical vein
1
epithelial cell of proximal tubule
1
glomerular endothelial cell
1
granulosa cell
1
hepatic stellate cell
1
keratinocyte
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
luminal epithelial cell of prostatic duct
1
lymphocyte of B lineage
1
mammary gland epithelial cell
1
mast cell
1
mesothelial cell
1
naive t cell
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic delta cell
1
pancreatic ductal cell
1
pancreatic endocrine cell
1
pancreatic polypeptide-secreting cell
1
parietal cell
1
peptic cell
1
renal cortical epithelial cell
1
skeletal muscle cell
1
skeletal muscle myoblast
1
smooth muscle cell of the brain vasculature
1
thyroid follicular cell
1
type II pneumocyte
Organ
4
epithelium
3
intestine
1
pancreas
Life stage
1
adult
Date released
4
February, 2024
Software used
4
deltasvm
Lab
3
Bing Ren, UCSD
1
Kyle Gaulton, UCSD
Project
4
AMP
RFA
4
AMP
month_released!
April, 2020
Showing 4 of 4 results
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Download
FileSet
DSR972LVJ
released
Annotation file set
: Variant allelic effects annotation of Enterocytes (sub-type3) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR623GGP
released
Annotation file set
: Variant allelic effects annotation of Enterocytes (sub-type2) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR654PGN
released
Annotation file set
: Variant allelic effects annotation of Enterocytes from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR964IEU
released
Annotation file set
: Genetic variants with deltaSVM predictions in pancreatic delta cell snATAC
Lab:
Kyle Gaulton, UCSD
Project:
AMP