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Schema
Citing CMDGA
Clear Filters
Annotation type
90
histone modifications
72
candidate regulatory elements
72
gene expression
57
accessible chromatin
53
target gene predictions
36
chromatin state
35
binding sites
4
variant allelic effects
1
representative DNase hypersensitivity sites
Annotation Category
4
Genetic variant effects
Annotation type Category
3
ATAC-seq
1
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
primary cell
45
tissue
4
cell line
4
in vitro differentiated cells
Biosample term
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
1
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
Organ
connective tissue
Date released
4
May, 2020
Software used
4
deltasvm
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
biosample_type!
primary cell
organ_slims!
connective tissue
Showing 4 of 4 results
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FileSet
DSR181VXG
released
Annotation file set
: Genetic variants with deltaSVM predictions in pancreatic progenitor ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR008HPH
released
Annotation file set
: Genetic variants with deltaSVM prediction in cardiomyocyte ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR696ULI
released
Annotation file set
: Genetic variants with deltaSVM predictions in cardiac precursor ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR835LQY
released
Annotation file set
: Genetic variants with deltaSVM predictions in beta cell iPS-derived pancreatic progenitor ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP