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Citing CMDGA
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Annotation type
15
accessible chromatin
12
candidate regulatory elements
11
target gene predictions
8
chromatin state
4
binding sites
3
variant allelic effects
1
histone modifications
Annotation Category
3
Genetic variant effects
Annotation type Category
2
DNase-seq
1
snATAC-seq
Available data
2
bed bed3+
File set status
3
released
Genome assembly (visualization)
2
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
1
tissue
Biosample term
1
retinal pigment epithelial cell
1
cortical cell of adrenal gland
1
endothelial cell of umbilical vein
Organ
39
epithelium
11
connective tissue
9
vasculature
7
brain
7
pancreas
6
kidney
4
liver
3
blood vessel
3
intestine
3
musculature of body
2
esophagus
2
stomach
1
adrenal gland
1
bronchus
1
eye
1
lung
1
mammary gland
1
prostate gland
1
skin of body
1
thyroid gland
1
vein
Life stage
1
newborn
Date released
2
May, 2020
1
February, 2024
Software used
3
deltasvm
Lab
2
AMP-T2D consortium
1
Bing Ren, UCSD
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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FileSet
DSR192HXJ
released
Annotation file set
: Variant allelic effects annotation of Adrenal cortical cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR088CRI
released
Annotation file set
: Variant allelic effects of endothelial cell of umbilical vein ENCODE DHSseq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR787MHT
released
Annotation file set
: Genetic variants with deltaSVM predictions in retinal pigment epithelial cell DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP