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Schema
Citing CMDGA
Clear Filters
Annotation type
46
candidate regulatory elements
28
target gene predictions
23
chromatin state
14
eQTL
14
gene expression
12
accessible chromatin
10
binding sites
8
histone modifications
6
Fine-mapped variants
4
variant allelic effects
2
differential activity
Annotation Category
4
Genetic variant effects
Annotation type Category
2
ATAC-seq
1
DNase-seq
1
snATAC-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
3
tissue
1
primary cell
Biosample term
1
omental fat pad
1
adipose tissue
1
luminal epithelial cell of prostatic duct
1
subcutaneous adipose tissue
Organ
41
epithelium
17
brain
16
connective tissue
16
kidney
15
vasculature
pancreas
10
heart
9
blood vessel
8
limb
7
musculature of body
4
artery
4
liver
3
adipose tissue
3
intestine
3
ureter
2
esophagus
2
eye
2
nerve
2
stomach
1
adrenal gland
1
bronchus
1
lung
1
mammary gland
1
prostate gland
1
skin of body
1
thyroid gland
1
vein
Date released
3
May, 2020
1
February, 2024
Software used
4
deltasvm
Lab
3
AMP-T2D consortium
1
Bing Ren, UCSD
Project
4
AMP
RFA
4
AMP
organ_slims!
pancreas
Showing 4 of 4 results
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Download
FileSet
DSR670LSP
released
Annotation file set
: Variant allelic effects annotation of Luminal epithelial cells from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR537CNJ
released
Annotation file set
: Genetic variants with deltaSVM predictions in adipose omental fat pad DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR802UOO
released
Annotation file set
: Genetic variants with deltaSVM predictions in adipose white tissue ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR088HBN
released
Annotation file set
: Genetic variants with deltaSVM predictions in adipose subcutaneous ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP