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Schema
Citing CMDGA
Clear Filters
Annotation type
51
candidate regulatory elements
42
target gene predictions
31
accessible chromatin
31
chromatin state
25
gene expression
14
histone modifications
13
binding sites
9
eQTL
5
variant allelic effects
4
differential activity
3
Fine-mapped variants
1
caQTL
Annotation Category
5
Genetic variant effects
Annotation type Category
2
DNase-seq
2
snATAC-seq
1
ATAC-seq
Available data
4
bed bed3+
File set status
5
released
Genome assembly (visualization)
4
hg19
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
2
hepatocyte
1
Liver fetal (hepatocyte)
1
cortical cell of adrenal gland
1
hepatic stellate cell
Organ
41
epithelium
17
brain
16
connective tissue
16
kidney
15
vasculature
11
pancreas
10
heart
9
blood vessel
8
limb
7
musculature of body
4
artery
4
liver
3
adipose tissue
3
intestine
3
ureter
2
esophagus
2
eye
2
nerve
2
stomach
1
adrenal gland
1
bronchus
1
lung
mammary gland
1
prostate gland
1
skin of body
1
thyroid gland
1
vein
Life stage
1
adult
1
fetal
Date released
3
May, 2020
2
February, 2024
Software used
5
deltasvm
Lab
3
AMP-T2D consortium
2
Bing Ren, UCSD
Project
5
AMP
RFA
5
AMP
organ_slims!
mammary gland
small intestine
Showing 5 of 5 results
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Download
FileSet
DSR179RJC
released
Annotation file set
: Variant allelic effects annotation of Hepatocytes from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR192HXJ
released
Annotation file set
: Variant allelic effects annotation of Adrenal cortical cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR134FAU
released
Annotation file set
: Variant allelic effects of hepatic stellate cell ENCODE DHSseq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR438ODC
released
Annotation file set
: Genetic variants with deltaSVM predictions in liver fetal ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR488RFU
released
Annotation file set
: Genetic variants with deltaSVM predictions in liver hepatocyte DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP