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Schema
Citing CMDGA
Clear Filters
Annotation type
40
candidate regulatory elements
32
target gene predictions
25
chromatin state
23
accessible chromatin
21
gene expression
15
histone modifications
11
eQTL
10
binding sites
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
1
differential activity
Annotation Category
4
Genetic variant effects
Annotation type Category
2
DNase-seq
1
ATAC-seq
1
snATAC-seq
Available data
3
bed bed3+
File set status
4
released
Genome assembly (visualization)
3
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
2
hepatocyte
1
Liver fetal (hepatocyte)
1
hepatic stellate cell
Organ
41
epithelium
17
brain
16
connective tissue
16
kidney
15
vasculature
11
pancreas
10
heart
blood vessel
8
limb
7
musculature of body
4
artery
4
liver
3
adipose tissue
3
intestine
ureter
2
esophagus
2
eye
2
nerve
2
stomach
1
adrenal gland
1
bronchus
1
lung
1
mammary gland
1
prostate gland
1
skin of body
1
thyroid gland
1
vein
0
gonad
Life stage
1
adult
1
fetal
Date released
3
May, 2020
1
February, 2024
Software used
4
deltasvm
Lab
3
AMP-T2D consortium
1
Bing Ren, UCSD
Project
4
AMP
RFA
4
AMP
organ_slims!
blood vessel
ureter
Showing 4 of 4 results
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Download
FileSet
DSR179RJC
released
Annotation file set
: Variant allelic effects annotation of Hepatocytes from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR134FAU
released
Annotation file set
: Variant allelic effects of hepatic stellate cell ENCODE DHSseq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR438ODC
released
Annotation file set
: Genetic variants with deltaSVM predictions in liver fetal ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR488RFU
released
Annotation file set
: Genetic variants with deltaSVM predictions in liver hepatocyte DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP