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Citing CMDGA
Clear Filters
Annotation type
1688
candidate regulatory elements
1344
target gene predictions
976
histone modifications
931
chromatin state
909
accessible chromatin
812
binding sites
681
gene expression
169
eQTL
167
differential activity
variant allelic effects
71
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Annotation Category
4
Genetic variant effects
Annotation type Category
2
RNA-seq
Available data
2
bed bed3+
2
tsv
File set status
4
released
Genome assembly (visualization)
2
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
2
islet of Langerhans
2
tissue
Organ
2
pancreas
Date released
2
March, 2023
1
August, 2020
1
August, 2022
Software used
2
combined S2G strategy
2
qTLtools
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
annotation_type!
variant allelic effects
organ_slims!
spinal cord
vein
Showing 4 of 4 results
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FileSet
DSR083JNZ
released
Annotation file set
: All significant variant-to-gene associations for phenotypes with a sQTL effect at FDR 1%.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR642HGW
released
Annotation file set
: All significant variant-to-gene associations for phenotypes with a eQTL effect at FDR 1%.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR860BOU
released
Annotation file set
: Variant to gene predictions in 1000G
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR619JSP
released
Annotation file set
: Variant to gene predictions in UK biobank
Lab:
AMP-T2D consortium
Project:
AMP