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Schema
Citing CMDGA
Clear Filters
Annotation type
1469
candidate regulatory elements
1226
target gene predictions
947
histone modifications
802
chromatin state
786
accessible chromatin
765
binding sites
463
gene expression
165
eQTL
124
variant allelic effects
111
differential activity
74
Fine-mapped variants
12
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Annotation Category
4
Genetic variant effects
Annotation type Category
2
RNA-seq
Available data
2
bed bed3+
2
tsv
File set status
4
released
Genome assembly (visualization)
2
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
2
islet of Langerhans
2
tissue
Organ
2
pancreas
Date released
2
March, 2023
1
August, 2020
1
August, 2022
Software used
2
combined S2G strategy
2
qTLtools
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
month_released!
January, 2020
May, 2022
organ_slims!
blood
kidney
Showing 4 of 4 results
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FileSet
DSR083JNZ
released
Annotation file set
: All significant variant-to-gene associations for phenotypes with a sQTL effect at FDR 1%.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR642HGW
released
Annotation file set
: All significant variant-to-gene associations for phenotypes with a eQTL effect at FDR 1%.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR860BOU
released
Annotation file set
: Variant to gene predictions in 1000G
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR619JSP
released
Annotation file set
: Variant to gene predictions in UK biobank
Lab:
AMP-T2D consortium
Project:
AMP