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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
Annotation Category
1
cis-regulatory elements
Annotation type Category
ChIP-seq
30
DNase-seq
RNA-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
in vitro differentiated cells
Biosample term
52
HeLa-S3
39
H1-hESC
34
endothelial cell
26
fibroblast
24
retina
23
macrophage
21
pancreatic ductal cell
20
monocyte
20
pigmented layer of retina
19
HFFc6
19
pericyte cell
19
smooth muscle cell
18
pancreatic beta cell
17
epithelial cell of proximal tubule
17
pancreatic acinar cell
16
glomerular endothelial cell
16
pancreatic alpha cell
16
pancreatic delta cell
15
CD14-positive monocyte
15
hepatocyte
13
excitatory neuron
12
adipocyte
11
astrocyte
11
kidney
11
liver
11
neural progenitor cell
10
EndoC_BH1
10
islet of Langerhans
10
pancreatic stellate cell
10
pituitary stalk
9
CD8-positive, alpha-beta T cell
9
T cell
9
extended pluripotent stem (EPS) cells
9
heart
9
pancreas
9
progenitor cell of endocrine pancreas
9
retinal pigment epithelial cell
9
skeletal muscle fiber
8
B cell
8
glomerular visceral epithelial cell
8
glutamatergic neuron
7
H9
7
adipose tissue
7
coronary artery
7
dendritic cell
7
embryonic stem cell
7
erythroblast
7
heart left ventricle
7
kidney interstitial cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
mesenchymal stem cell
7
natural killer cell
7
skeletal muscle satellite cell
7
type II pneumocyte
6
CD4-positive helper T cell
6
SGBS preadipocytes
6
cardiomyocytes (cardiac muscle cell)
6
colon epithelial cell
6
cortical cell of adrenal gland
6
endothelial cell of hepatic sinusoid
6
enterocyte
6
keratinocyte
6
lymphocyte
6
mesangial cell
6
olfactory receptor cell
6
osteoblast
6
pancreatic polypeptide-secreting cell
6
type I muscle cell
6
type II muscle cell
5
cardiac fibroblast
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
Glomerular Capillary Endothelial Cell
5
HUES8
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
M2 Macrophage
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
T Cell
5
Transitional Principal-Intercalated Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
basal cell
5
cardiac muscle cell
5
chondrocyte
5
endothelial cell of umbilical vein
5
fibroblast of cardiac tissue
5
gabaergic neuron
5
heart right ventricle
5
hepatic stellate cell
5
inhibitory neuron
5
kidney cortex collecting duct principal cell
5
kidney distal convoluted tubule epithelial cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
pancreatic endothelial cell
5
psoas muscle
5
right atrium auricular region
5
stomach
5
tibial artery
5
tibial nerve
4
CD4-positive, alpha-beta T cell
4
CyT49
4
HepG2
4
Pancreatic progenitors (progenitor cell of endocrine pancreas)
4
Schwann cell
4
adrenal gland
4
adult endothelial progenitor cell
4
blood vessel smooth muscle cell
4
endothelial cell of lymphatic vessel
4
enteric smooth muscle cell
4
iPSC derived cell line
4
kidney connecting tubule epithelial cell
4
leukocyte
4
luminal epithelial cell of mammary gland
4
mammary gland epithelial cell
4
mast cell
4
megakaryocyte
4
memory B cell
4
mesothelial cell
4
myofibroblast cell
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
pancreatic A cell
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
regulatory T cell
4
skeletal muscle myoblast
4
skin fibroblast
4
smooth muscle cell of the esophagus
4
spleen
4
thymus
4
type B pancreatic cell
4
type I pneumocyte
4
vascular associated smooth muscle cell
3
Ammon's horn
3
Cycling Mononuclear Phagocyte
3
Jurkat
3
Mast Cell
3
U937
3
activated CD4-positive, alpha-beta T cell
3
aorta
3
brain
3
brain pericyte
3
caudate nucleus
3
choroid plexus epithelial cell
3
ciliated cell
3
club cell
3
endocardial cell
3
enteric neuron
3
frontal cortex
3
glial cell
3
globus pallidus
3
goblet cell
Date released
1
June, 2020
Software used
1
macs
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
annotation_type_category!
ChIP-seq
RNA-seq
organ_slims!
blood
Showing 1 of 1 results
table-tab-icon
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Download
FileSet
DSR365ACB
released
Annotation file set
: Accessible chromatin annotation for Blood Hematopoietic Stem Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP