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Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
2
target gene predictions
1
eQTL
1
gene expression
Annotation Category
2
Target gene links
2
cis-regulatory elements
1
Gene expression levels
1
Genetic variant effects
Annotation type Category
ChIP-seq
23
DNase-seq
2
ATAC-seq
2
RNA-seq
1
H3K27ac ChIP-Seq
1
pCHi-C
Available data
4
bed bed3+
1
bigWig
1
tsv
File set status
6
released
Genome assembly (visualization)
4
hg19
2
GRCh38
Organism
6
Homo sapiens
Biosample type
6
tissue
Biosample term
6
spleen
Organ
687
epithelium
328
kidney
244
connective tissue
212
pancreas
159
brain
133
vasculature
96
blood vessel
89
heart
79
embryo
77
liver
73
musculature of body
62
eye
60
uterus
50
limb
49
adipose tissue
48
bodily fluid
48
intestine
47
blood
40
artery
29
skin of body
26
lung
25
large intestine
21
bone element
20
stomach
17
adrenal gland
14
esophagus
13
extraembryonic component
13
gonad
13
lymphatic vessel
13
mammary gland
12
nerve
12
pituitary gland
10
prostate gland
9
lymph node
9
spinal cord
8
skeleton
8
small intestine
7
ovary
7
thyroid gland
7
ureter
6
placenta
6
spleen
6
vein
5
bronchus
5
testis
5
thymus
4
bone marrow
4
breast
4
lymphoid tissue
4
penis
3
mouth
3
urinary bladder
2
tongue
2
vagina
1
nose
1
pericardium
1
trachea
Life stage
1
adult
Date released
1
January, 2022
1
June, 2020
1
March, 2020
1
March, 2024
1
May, 2021
1
November, 2019
Software used
2
macs
1
abc
1
nospecificsoft_customcode
1
qTLtools
1
r
Lab
5
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
6
AMP
RFA
6
AMP
annotation_type_category!
ChIP-seq
biosample_term_name!
WERI-Rb-1
Showing 6 of 6 results
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Download
FileSet
DSR747USS
released
Annotation file set
: Gene expression summary from GTEx V8 - Gene TPMs for Spleen.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR580SJJ
released
Annotation file set
: spleen eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR619BAN
released
Annotation file set
: enhancer-gene predicton of spleen-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR346XCX
released
Annotation file set
: Accessible chromatin annotation for Others Spleen from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR666FEH
released
Annotation file set
: A target gene prediction annotation in Human Spleen of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR188AUG
released
Annotation file set
: Accessible chromatin annotation of spleen
Lab:
AMP-T2D consortium
Project:
AMP