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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
Annotation Category
1
cis-regulatory elements
Annotation type Category
ChIP-seq
3
DNase-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
in vitro differentiated cells
1
cell line
Biosample term
52
HeLa-S3
47
H1-hESC
42
monocyte
39
islet of Langerhans
37
endothelial cell
30
macrophage
28
fibroblast
26
retina
25
hepatocyte
21
EndoC_BH1
20
pigmented layer of retina
20
smooth muscle cell
19
HFFc6
19
kidney
19
pericyte cell
18
K562
18
epithelial cell of proximal tubule
18
pancreatic beta cell
18
pancreatic ductal cell
18
subcutaneous adipose tissue
17
glomerular endothelial cell
17
liver
17
pancreatic acinar cell
17
pancreatic alpha cell
16
pancreatic delta cell
15
CD14-positive monocyte
15
regulatory T cell
12
CD8-positive, alpha-beta T cell
12
adipose tissue
12
astrocyte
12
excitatory neuron
12
right atrium auricular region
12
tibial nerve
11
T-helper 1 cell
11
heart
10
B cell
10
T cell
10
T-helper 17 cell
10
frontal cortex
10
pancreas
10
pancreatic stellate cell
10
pituitary stalk
10
putamen
9
caudate nucleus
9
glomerular visceral epithelial cell
9
heart left ventricle
9
memory B cell
9
naive thymus-derived CD8-positive, alpha-beta T cell
9
omental fat pad
9
skeletal muscle fiber
8
Ammon's horn
8
GM12878
8
body of pancreas
8
cerebellum
8
glutamatergic neuron
8
induced pluripotent stem cell
8
naive thymus-derived CD4-positive, alpha-beta T cell
8
natural killer cell
8
osteoblast
8
skeletal muscle satellite cell
7
H9
7
erythroblast
7
kidney interstitial cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
lymphoblastoid cell line
7
mesangial cell
7
stomach
7
substantia nigra
7
type I muscle cell
7
type II muscle cell
7
type II pneumocyte
6
T-helper 2 cell
6
adrenal gland
6
amygdala
6
anterior cingulate cortex
6
brain
6
cerebellum (Hemisphere)
6
colon epithelial cell
6
cortical cell of adrenal gland
6
enterocyte
6
gamma-delta T cell
6
hypothalamus
6
iPSC derived cell line
6
keratinocyte
6
lymphocyte
6
mesenchymal stem cell
6
naive B cell
6
nucleus accumbens
6
olfactory receptor cell
6
pancreatic polypeptide-secreting cell
6
spleen
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
B Cell
5
C1 segment of cervical spinal cord
5
CD4-positive helper T cell
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
HUES8
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
M2 Macrophage
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Parietal Epithelial Cell
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
T Cell
5
T follicular helper cell
5
Transitional Principal-Intercalated Cell
5
basal cell
5
central memory CD8-positive, alpha-beta T cell
5
effector memory CD8-positive, alpha-beta T cell
5
fibroblast of cardiac tissue
5
gabaergic neuron
5
gastrocnemius medialis(Muscle - Skeletal)
5
heart right ventricle
5
hepatic stellate cell
5
inhibitory neuron
5
kidney cortex collecting duct principal cell
5
kidney distal convoluted tubule epithelial cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
left ventricle myocardium
5
neutrophil
5
ovary
5
psoas muscle
5
right lobe of liver
4
CD4-positive, alpha-beta T cell
4
CyT49
4
HepG2
4
Schwann cell
4
activated CD4-positive, alpha-beta T cell
4
adipocyte
4
adult endothelial progenitor cell
4
blood vessel smooth muscle cell
4
bone tissue
4
cardiac muscle cell
4
cartilage tissue
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
effector CD4-positive, alpha-beta T cell
4
effector T cell
4
enteric smooth muscle cell
4
kidney connecting tubule epithelial cell
4
kidney glomerular epithelial cell
4
leukocyte
4
luminal epithelial cell of mammary gland
4
mast cell
4
mature natural killer cell
4
megakaryocyte
4
memory T cell
4
memory regulatory T cell
4
mesothelial cell
4
myofibroblast cell
4
nephron progenitor
4
occipital lobe
4
pancreatic A cell
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
plasma cell
4
renal cortical epithelial cell
4
skeletal muscle myoblast
4
small intestine
4
smooth muscle cell of the esophagus
Date released
1
June, 2020
Software used
1
macs
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
annotation_type_category!
ChIP-seq
biosample_type!
in vitro differentiated cells
organ_slims!
vasculature
Showing 1 of 1 results
table-tab-icon
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Download
FileSet
DSR515IEQ
released
Annotation file set
: Accessible chromatin annotation for Lung AG04450 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP