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Schema
Citing CMDGA
Clear Filters
Annotation type
3
target gene predictions
Annotation Category
3
Target gene links
Annotation type Category
ChIP-seq
8
DNase-seq
2
pCHi-C
1
ATAC-seq
Available data
4
bed bed3+
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
26
endothelial cell
25
monocyte
20
macrophage
17
epithelial cell of proximal tubule
17
fibroblast
16
glomerular endothelial cell
15
CD14-positive monocyte
15
smooth muscle cell
14
hepatocyte
12
regulatory T cell
11
pancreatic ductal cell
11
pericyte cell
10
pancreatic acinar cell
10
pancreatic delta cell
9
T-helper 1 cell
9
pancreatic alpha cell
9
pancreatic beta cell
8
CD8-positive, alpha-beta T cell
8
T-helper 17 cell
8
natural killer cell
7
B cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
naive thymus-derived CD4-positive, alpha-beta T cell
6
glomerular visceral epithelial cell
6
glutamatergic neuron
6
kidney interstitial cell
6
mast cell
6
naive thymus-derived CD8-positive, alpha-beta T cell
6
olfactory receptor cell
6
pancreatic stellate cell
6
skeletal muscle fiber
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
CD4-positive helper T cell
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
Glomerular Capillary Endothelial Cell
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
M2 Macrophage
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
T Cell
5
T cell
5
Transitional Principal-Intercalated Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
adipocyte
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
memory B cell
5
mesangial cell
5
neutrophil
5
osteoblast
5
type I muscle cell
5
type II muscle cell
4
T-helper 2 cell
4
adult endothelial progenitor cell
4
astrocyte
4
endothelial cell of hepatic sinusoid
4
endothelial cell of lymphatic vessel
4
endothelial cell of umbilical vein
4
gamma-delta T cell
4
hepatic stellate cell
4
keratinocyte
4
kidney connecting tubule epithelial cell
4
kidney distal convoluted tubule epithelial cell
4
mesenchymal stem cell
4
myofibroblast cell
4
nephron progenitor
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic endothelial cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
skeletal muscle satellite cell
4
vascular associated smooth muscle cell
3
CD4-positive, alpha-beta T cell
3
Cycling Mononuclear Phagocyte
3
Mast Cell
3
S-shaped body
3
Schwann cell
3
T follicular helper cell
3
activated CD4-positive, alpha-beta T cell
3
basal cell
3
blood cell
3
cardiac muscle cell
3
central memory CD8-positive, alpha-beta T cell
3
colon epithelial cell
3
cortical cell of adrenal gland
3
effector memory CD8-positive, alpha-beta T cell
3
endocardial cell
3
enterocyte
3
gabaergic neuron
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney glomerular epithelial cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
leukocyte
3
naive B cel
3
naive B cell
3
pancreatic A cell
3
pancreatic polypeptide-secreting cell
3
pancreatic quiescent stellate cell
3
renal cortical epithelial cell
3
skeletal muscle myoblast
3
smooth muscle cell of the coronary artery
3
type B pancreatic cell
3
type II pneumocyte
2
cardiac fibroblast
2
Kupffer cell
2
T-cell
2
activated CD8-positive, alpha-beta T cell
2
acute myeloid leukemia cell
2
alternatively activated macrophage
2
articular chondrocyte
2
blood vessel smooth muscle cell
2
bone marrow cell
2
cholangiocyte
2
dendritic cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
enteric smooth muscle cell
2
epithelial cell of esophagus
2
erythroblast
2
fat cell
2
foreskin fibroblast
2
glial cell
2
goblet cell
2
inflammatory macrophage
2
kidney epithelial cell
2
kidney inner medulla collecting duct intercalated cell
2
kidney tubule cell
2
luminal epithelial cell of mammary gland
2
mammary epithelial cell
2
mammary gland epithelial cell
2
mature natural killer cell
2
megakaryocyte
2
memory T cell
2
memory regulatory T cell
2
mesothelial cell
2
microglial cell
2
naive regulatory T cell
2
naive t cell
2
neural cell
2
neuronal stem cell
2
oligodendrocyte
2
parietal cell
2
peptic cell
2
plasma cell
2
regular ventricular cardiac myocyte
2
renal vesicle
2
skin fibroblast
2
smooth muscle cell of the esophagus
Date released
2
May, 2020
1
November, 2021
Software used
2
chicago
1
abc
Lab
2
AMP-T2D consortium
1
Bing Ren, UCSD
Project
2
AMP
1
ENCODE
RFA
2
AMP
1
ENCODE3
annotation_type_category!
ChIP-seq
files.file_type!
bigWig
Showing 3 of 3 results
table-tab-icon
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Download
FileSet
DSR550FOW
released
Annotation file set
: Target gene predictions of T lymphocyte 2 (CD4+) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR574MPN
released
Annotation file set
: Target gene predictions annotation of EGAS00001001911 promoter capture Hi-C of CD4-positive, alpha-beta T cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR267YBK
released
Annotation file set
: Target gene predictions annotation of EGAS00001001911 promoter capture Hi-C of CD4-positive, alpha-beta T cell
Lab:
AMP-T2D consortium
Project:
AMP