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Schema
Citing CMDGA
Clear Filters
Annotation type
2
histone modifications
1
binding sites
1
gene expression
Annotation Category
3
cis-regulatory elements
1
Gene expression levels
Annotation type Category
DNase-seq
68
ChIP-seq
2
ATAC-seq
2
H3K27ac ChIP-Seq
1
RNA-seq
Available data
bed bed9
3
bed bed3+
1
tsv
File set status
4
released
Genome assembly (visualization)
3
hg19
Organism
4
Homo sapiens
Biosample type
2
cell line
2
tissue
Biosample term
125
monocyte
52
HeLa-S3
49
H1-hESC
44
endothelial cell
41
CD8-positive, alpha-beta T cell
41
islet of Langerhans
38
neural progenitor cell
33
fibroblast
27
hepatocyte
26
macrophage
25
retina
23
EndoC_BH1
23
pancreatic ductal cell
23
smooth muscle cell
21
pericyte cell
20
K562
20
breast cancer cell
20
pigmented layer of retina
19
HFFc6
18
kidney
18
liver
18
pancreatic beta cell
18
subcutaneous adipose tissue
17
epithelial cell of proximal tubule
17
pancreatic alpha cell
16
adipocyte
16
endothelial cell of hepatic sinusoid
16
pancreatic acinar cell
15
induced pluripotent stem cell
15
pancreatic delta cell
14
B cell
14
glomerular endothelial cell
13
keratinocyte
12
embryonic stem cell
12
excitatory neuron
12
neuroblastoma cell
12
regulatory T cell
11
HepG2
10
GM12878
10
adipose tissue
10
astrocyte
10
gastric cancer cell
10
natural killer cell
10
pancreatic stellate cell
10
progenitor cell of endocrine pancreas
9
Rhabdomyosarcoma
9
T cell
9
cardiomyocytes
9
coronary artery
9
diffuse intrinsic pontine glioma
9
erythroblast
9
liposarcoma
8
B-lymphoblastoid cell line
8
T-helper 1 cell
8
T-helper 17 cell
8
fibroblast cell line
8
mast cell
8
retinal pigment epithelial cell
8
skeletal muscle fiber
7
CD4-positive, alpha-beta T cell
7
T-cell acute lymphoblastic leukemia
7
cardiomyocytes (cardiac muscle cell)
7
esophageal adenocarcinoma
7
extended pluripotent stem (EPS) cells
7
mature neutrophil
7
memory B cell
7
osteoblast
7
skeletal muscle satellite cell
7
tibial nerve
6
Ammon's horn
6
Chondroid Chordoma
6
H9
6
amygdala
6
cardiac precursors (cardiac muscle cell)
6
cerebellum
6
chondrocyte
6
glomerular visceral epithelial cell
6
hESC cell
6
heart
6
hypothalamus
6
lymphocyte
6
naive thymus-derived CD4-positive, alpha-beta T cell
6
naive thymus-derived CD8-positive, alpha-beta T cell
6
neuroblastoma cell line
6
neuronal stem cell
6
neutrophil
6
omental fat pad
6
plasma cell
6
right atrium auricular region
6
tibial artery
6
type I muscle cell
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
C1 segment of cervical spinal cord
5
CD14-positive, CD16-negative classical monocyte
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
CyT49
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Ewing sarcoma
5
Fibroblast
5
Glomerular Capillary Endothelial Cell
5
HUES8
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
M2 Macrophage
5
MCF-7
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Podocyte
5
Proximal Tubule Epithelial Cell Segment 3
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
SGBS preadipocytes
5
T Cell
5
T-helper 2 cell
5
Transitional Principal-Intercalated Cell
5
anterior cingulate cortex
5
body of pancreas
5
cardiac muscle cell
5
endothelial cell of lymphatic vessel
5
enterocyte
5
fibroblast of cardiac tissue
5
frontal cortex
5
glutamatergic neuron
5
kidney interstitial cell
5
kidney loop of Henle thin ascending limb epithelial cell
5
mammary epithelial cell
5
mammary gland epithelial cell
5
mesangial cell
5
mesenchymal stem cell
5
osteosarcoma
5
prostate cancer cell line
5
smooth muscle cell of the coronary artery
4
CD4-positive helper T cell
4
GM18505
4
GM19099
4
GM19193
4
GM19238
4
GM19239
4
GM19240
4
HS-SY-2 cell
4
Jurkat
4
Mantle cell lymphoma
4
Principal Cell
4
Proximal Tubule Epithelial Cell Segment 1 and 2
4
Rh-4 cell
4
Schwann cell
4
T follicular helper cell
4
Th1 cell
4
Vascular Smooth Muscle Cell / Pericyte
4
acute myeloid leukemia
4
aortic endothelial cell
4
brain
4
cartilage tissue
4
caudate nucleus
4
colon epithelial cell
4
cortical cell of adrenal gland
4
diffuse large B-cell lymphoma
4
esophageal squamous cell carcinoma
4
foreskin fibroblast
4
gamma-delta T cell
4
heart left ventricle
4
hepatic stellate cell
4
left cardiac atrium
4
myofibroblast cell
Organ
2
prostate gland
2
stomach
Life stage
1
adult
Date released
3
February, 2021
January, 2022
1
March, 2024
Software used
3
macs
1
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
annotation_type_category!
DNase-seq
files.file_type!
bed bed9
month_released!
January, 2022
Showing 4 of 4 results
table-tab-icon
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Download
FileSet
DSR007TCR
released
Annotation file set
: Gene expression summary from GTEx V8 - Gene TPMs for Stomach.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR228CGU
released
Annotation file set
: Histone modifications annotation for Prostate 22Rv1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR497XLY
released
Annotation file set
: Histone modifications annotation for Digestive tract Gastric_primary_sample from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR086JJG
released
Annotation file set
: Binding sites annotation for Prostate 22Rv1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP