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Schema
Citing CMDGA
Clear Filters
Annotation type
2
chromatin state
Annotation Category
2
cis-regulatory elements
Annotation type Category
10
ChIP-seq
DNase-seq
Available data
2
bed bed9
File set status
2
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
44
endothelial cell
29
hepatocyte
23
pancreatic ductal cell
21
EndoC_BH1
20
pigmented layer of retina
18
epithelial cell of proximal tubule
18
pancreatic beta cell
17
pancreatic acinar cell
17
pancreatic alpha cell
16
endothelial cell of hepatic sinusoid
16
pancreatic delta cell
15
glomerular endothelial cell
15
keratinocyte
11
retinal pigment epithelial cell
9
mammary gland epithelial cell
8
endothelial cell of umbilical vein
7
colon epithelial cell
7
endothelial cell of lymphatic vessel
7
glomerular visceral epithelial cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
type II pneumocyte
6
cortical cell of adrenal gland
6
enterocyte
6
foreskin keratinocyte
6
pancreatic polypeptide-secreting cell
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
Connecting Tubule Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Glomerular Capillary Endothelial Cell
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
Medullary Thick Ascending Limb Cell
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Transitional Principal-Intercalated Cell
5
bronchial epithelial cell
5
endocardial cell
5
kidney cortex collecting duct principal cell
5
kidney distal convoluted tubule epithelial cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
luminal epithelial cell of mammary gland
5
mammary epithelial cell
5
pancreatic endothelial cell
4
aortic endothelial cell
4
choroid plexus epithelial cell
4
dermis lymphatic vessel endothelial cell
4
epithelial cell of prostate
4
kidney connecting tubule epithelial cell
4
mesothelial cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic gamma+epsilon cell
4
tracheal epithelial cell
4
type I pneumocyte
3
S-shaped body
3
cholangiocyte
3
club cell
3
epithelial cell of esophagus
3
goblet cell
3
hepatocyte(AFP)
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney glomerular epithelial cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney tubule cell
3
meso-epithelial cell
3
pancreatic A cell
3
parietal cell
3
peptic cell
3
pulmonary artery endothelial cell
3
thyroid follicular cell
3
type B pancreatic cell
2
basal cell of epidermis
2
breast epithelium
2
capillary endothelial cell
2
cardiac endothelial cell
2
dermis blood vessel endothelial cell
2
eccrine cell
2
endothelial cell of coronary artery
2
enterochromaffin-like cell
2
enterocyte of epithelium of small intestine
2
esophagus squamous epithelium
2
foveolar cell of stomach
2
granular cell of epidermis
2
kidney epithelial cell
2
kidney epithelium
2
kidney inner medulla collecting duct intercalated cell
2
myoepithelial cell
2
myoepithelial cell of mammary gland
2
non keratinizing barrier epithelial cell
2
paneth cell
2
renal connecting tubule
2
renal cortical epithelial cell
2
renal principal cell
2
renal vesicle
2
respiratory goblet cell
2
small intestine goblet cell
2
stomach neuroendocrine cell
2
type I cell of adrenal cortex
2
type II cell of adrenal cortex
2
ureteric bud
2
vein endothelial cell
1
Liver fetal (hepatocyte)
1
brain microvascular endothelial cell
1
breast - mammary tissue
1
bronchial goblet cell
1
chromaffin cell of adrenal gland
1
ciliated epithelial cell
1
corneal epithelium
1
dermis microvascular lymphatic vessel endothelial cell
1
enteroendocrine cell
1
epidermal melanocyte
1
epithelial cell of amnion
1
epithelial cell of distal tubule
1
esophagus - mucosa
1
gastric goblet cell
1
granulosa cell
1
intermediate endothelial cell
1
intestinal epithelial cell
1
intestinal epithelium
1
iris pigment epithelial cell
1
kidney capillary endothelial cell
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
luminal epithelial cell of prostatic duct
1
lung microvascular endothelial cell
1
lung neuroendocrine cell
1
nephron tubule
1
neuroendocrine cell
1
non-pigmented ciliary epithelial cell
1
pancreatic D cell
1
pancreatic PP cell
1
parietal epithelial cell
1
placental villus capillary endothelial cell
1
proximal tubule
1
renal alpha-intercalated cell
1
renal beta-intercalated cell
1
renal glomerulus
1
renal intercalated cell
Organ
2
epithelium
2
esophagus
Life stage
2
adult
Date released
2
September, 2022
Software used
2
chromhmm
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
annotation_type_category!
DNase-seq
Showing 2 of 2 results
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Download
FileSet
DSR901NXJ
released
Annotation file set
: Chromatin states for BSS00326 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR178JVZ
released
Annotation file set
: Chromatin states for BSS00325 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP