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Schema
Citing CMDGA
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Annotation type
1
gene expression
1
histone modifications
Annotation Category
1
Gene expression levels
1
cis-regulatory elements
Annotation type Category
DNase-seq
22
ChIP-seq
2
ATAC-seq
2
H3K27ac ChIP-Seq
1
RNA-seq
Available data
1
bed bed3+
1
tsv
File set status
2
released
Genome assembly (visualization)
1
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
125
monocyte
52
HeLa-S3
49
H1-hESC
41
CD8-positive, alpha-beta T cell
41
endothelial cell
40
islet of Langerhans
38
neural progenitor cell
30
fibroblast
26
hepatocyte
25
retina
23
EndoC_BH1
23
macrophage
23
pancreatic ductal cell
21
smooth muscle cell
20
K562
20
breast cancer cell
20
kidney
20
pigmented layer of retina
19
HFFc6
19
pericyte cell
18
embryonic stem cell
18
liver
18
subcutaneous adipose tissue
17
epithelial cell of proximal tubule
17
pancreatic beta cell
16
endothelial cell of hepatic sinusoid
16
pancreatic acinar cell
15
induced pluripotent stem cell
15
pancreatic alpha cell
14
adipocyte
14
glomerular endothelial cell
13
keratinocyte
12
excitatory neuron
12
neuroblastoma cell
12
pancreatic delta cell
12
regulatory T cell
11
B cell
10
GM12878
10
adipose tissue
10
astrocyte
10
coronary artery
10
gastric cancer cell
10
pancreatic stellate cell
10
progenitor cell of endocrine pancreas
9
Rhabdomyosarcoma
9
T cell
9
cardiomyocytes
9
diffuse intrinsic pontine glioma
9
erythroblast
9
liposarcoma
9
skeletal muscle satellite cell
8
B-lymphoblastoid cell line
8
T-helper 1 cell
8
T-helper 17 cell
8
fibroblast cell line
8
heart left ventricle
8
retinal pigment epithelial cell
8
skeletal muscle fiber
7
CD4-positive, alpha-beta T cell
7
HepG2
7
T-cell acute lymphoblastic leukemia
7
cardiomyocytes (cardiac muscle cell)
7
esophageal adenocarcinoma
7
extended pluripotent stem (EPS) cells
7
heart
7
mature neutrophil
7
memory B cell
7
mesenchymal stem cell
7
osteoblast
7
tibial nerve
6
Ammon's horn
6
Chondroid Chordoma
6
H9
6
amygdala
6
cardiac precursors (cardiac muscle cell)
6
cerebellum
6
chondrocyte
6
glomerular visceral epithelial cell
6
hESC cell
6
hypothalamus
6
lymphocyte
6
naive thymus-derived CD4-positive, alpha-beta T cell
6
naive thymus-derived CD8-positive, alpha-beta T cell
6
natural killer cell
6
neuroblastoma cell line
6
neutrophil
6
omental fat pad
6
plasma cell
6
right atrium auricular region
6
tibial artery
6
type I muscle cell
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
C1 segment of cervical spinal cord
5
CD14-positive, CD16-negative classical monocyte
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
CyT49
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Ewing sarcoma
5
Fibroblast
5
Glomerular Capillary Endothelial Cell
5
HUES8
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
M2 Macrophage
5
MCF-7
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Podocyte
5
Proximal Tubule Epithelial Cell Segment 3
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
SGBS preadipocytes
5
T Cell
5
T-helper 2 cell
5
Transitional Principal-Intercalated Cell
5
body of pancreas
5
brain
5
cardiac muscle cell
5
enterocyte
5
fibroblast of cardiac tissue
5
frontal cortex
5
glutamatergic neuron
5
kidney interstitial cell
5
kidney loop of Henle thin ascending limb epithelial cell
5
mammary epithelial cell
5
mammary gland epithelial cell
5
mast cell
5
mesangial cell
5
osteosarcoma
5
prostate cancer cell line
5
smooth muscle cell of the coronary artery
4
CD4-positive helper T cell
4
GM18505
4
GM19099
4
GM19193
4
GM19238
4
GM19239
4
GM19240
4
HS-SY-2 cell
4
Jurkat
4
Mantle cell lymphoma
4
Principal Cell
4
Proximal Tubule Epithelial Cell Segment 1 and 2
4
Rh-4 cell
4
Schwann cell
4
T follicular helper cell
4
Th1 cell
4
Vascular Smooth Muscle Cell / Pericyte
4
acute myeloid leukemia
4
anterior cingulate cortex
4
aorta
4
ascending aorta
4
cartilage tissue
4
caudate nucleus
4
colon epithelial cell
4
cortical cell of adrenal gland
4
diffuse large B-cell lymphoma
4
endothelial cell of umbilical vein
4
esophageal squamous cell carcinoma
4
foreskin fibroblast
4
gamma-delta T cell
4
left cardiac atrium
4
naive B cell
4
nephron progenitor
Organ
2
stomach
Life stage
1
adult
Date released
September, 2022
1
February, 2021
January, 2022
1
March, 2024
Software used
1
macs
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
annotation_type_category!
DNase-seq
biosample_term_name!
thymus
month_released!
January, 2022
September, 2022
Showing 2 of 2 results
table-tab-icon
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Download
FileSet
DSR007TCR
released
Annotation file set
: Gene expression summary from GTEx V8 - Gene TPMs for Stomach.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR497XLY
released
Annotation file set
: Histone modifications annotation for Digestive tract Gastric_primary_sample from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP