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Schema
Citing CMDGA
Clear Filters
Annotation type
2
gene expression
1
accessible chromatin
Annotation Category
2
Gene expression levels
1
cis-regulatory elements
Annotation type Category
2
ATAC-seq
2
RNA-seq
1
DNase-seq
H3K27ac ChIP-Seq
Available data
1
bed bed3+
File set status
3
released
Genome assembly (visualization)
1
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
117
monocyte
32
CD8-positive, alpha-beta T cell
15
EndoC_BH1
11
embryonic stem cell
5
naive thymus-derived CD4-positive, alpha-beta T cell
5
neutrophil
3
islet of Langerhans
2
B cell
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
T-helper 2 cell
2
central memory CD8-positive, alpha-beta T cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
endothelial cell
2
gamma-delta T cell
2
mature natural killer cell
2
memory B cell
2
memory T cell
2
memory regulatory T cell
2
naive B cel
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
regulatory T cell
1
Schwann cell
1
activated pancreatic stellate cell
1
cardiac fibroblast
1
cardiac muscle cell (pacemaker cell)
1
cardiomyocytes (cardiac muscle cell)
1
cytotoxic T cell
1
hematopoietic multipotent progenitor cell
1
intermediate cardiomyocytes
1
intermediate endothelial cell
1
intermediate smooth muscle cell
1
macrophage
1
mast cell
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
myeloid dendritic cell
1
naive regulatory T cell
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic delta cell
1
pancreatic ductal cell
1
pancreatic epsilon cell
1
pancreatic polypeptide-secreting cell
1
quiescent pancreatic stellate cell
1
smooth muscle cell
1
stem cell
Organ
3
pancreas
Life stage
3
adult
Date released
40
September, 2022
23
February, 2021
8
August, 2021
6
March, 2023
3
January, 2022
3
March, 2020
3
May, 2020
3
May, 2021
2
August, 2017
1
April, 2019
1
February, 2024
1
January, 2018
1
January, 2020
1
June, 2020
1
November, 2019
1
November, 2021
Software used
2
r
1
macs
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
annotation_type_category!
H3K27ac ChIP-Seq
biosample_term_name!
GM12864
Showing 3 of 3 results
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Download
FileSet
DSR632ITR
released
Annotation file set
: RNA-seq of human islet pro-inflammatory cytokine exposure for GSE137136 (NO RAW DATA)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR357XYH
released
Annotation file set
: RNA-seq of human islet control for GSE137136 (NO RAW DATA)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR456JHZ
released
Annotation file set
: Accessible chromatin of ATAC-seq of human islet cytokine-treated for GSE123404
Lab:
AMP-T2D consortium
Project:
AMP