Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
variant to gene
Annotation Category
2
Genetic variant effects
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
2
tissue
Date released
1
August, 2020
1
August, 2022
Software used
2467
macs
2276
r
1017
chromhmm
827
encode-ccres
236
abc
124
deltasvm
116
deseq2
106
qTLtools
26
chicago
26
nospecificsoft_customcode
25
seurat
23
gtex_eqtl:V8
23
gtex_finemapping_eQTL:caveman
23
gtex_finemapping_eQTL:caviar
23
gtex_finemapping_eQTL:dapg
19
cicero
15
limix
12
deeptools
12
hiccups
12
samtools
12
umitools
11
rasqual
9
salmon
6
eigenmt
6
fastqtl
6
matrix-eQTL
5
peer
5
unknown
3
mach2qtl
3
minfi
3
sqtlseeker
2
combined S2G strategy
2
emmax
2
mpraflow
1
altius-index
1
bedops
1
betacells_cytokines_t1d
1
cisgenome
1
e-range
1
epacts
1
fast-lmm
1
pepatac
1
probabel
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
annotation_type_category!
RNA microarray
biosample_term_name!
hepatic stellate cell
organ_slims!
pancreas
Showing 2 of 2 results
table-tab-icon
matrix-icon
Download
FileSet
DSR860BOU
released
Annotation file set
: Variant to gene predictions in 1000G
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR619JSP
released
Annotation file set
: Variant to gene predictions in UK biobank
Lab:
AMP-T2D consortium
Project:
AMP