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Citing CMDGA
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Annotation type
2
pQTL
Annotation Category
2
Genetic variant effects
Annotation type Category
RNA-seq
2
quantitative proteomics
Available data
1
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
2
cartilage tissue
Organ
2
connective tissue
Life stage
2
adult
Date released
2
August, 2021
Software used
2542
macs
2065
r
1013
chromhmm
815
encode-ccres
248
abc
136
deltasvm
117
deseq2
32
cicero
27
chicago
27
nospecificsoft_customcode
25
seurat
18
samtools
14
hiccups
12
deeptools
12
umitools
11
rasqual
9
limix
6
eigenmt
3
minfi
2
combined S2G strategy
2
fastqtl
2
matrix-eQTL
2
mpraflow
2
peer
1
altius-index
1
bedops
1
betacells_cytokines_t1d
1
bimbam
1
cisgenome
1
e-range
1
haploview
1
pepatac
1
probabel
1
snap
1
spp
Lab
2
ITG
Project
2
ITG
RFA
2
ITG
annotation_type_category!
RNA-seq
biosample_term_name!
duodenal mucosa
stomach
Showing 2 of 2 results
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Download
FileSet
DSR524ZAH
released
Annotation file set
: pQTL of low-grade (intact; preserved) cartilage tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
ITG
FileSet
DSR651XSZ
released
Annotation file set
: pQTL of high grade (highly degraded; lesioned) cartilage tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
ITG