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Schema
Citing CMDGA
Clear Filters
Annotation type
6
gene expression
2
differential activity
Annotation Category
8
Gene expression levels
Annotation type Category
5
single cell RNA-seq
2
RNA-seq
1
scRNA-seq
Available data
54
bed bed3+
9
bigWig
8
tsv
3
bed bed9+
1
txt
File set status
8
released
Organism
8
Homo sapiens
Biosample type
8
primary cell
Biosample term
15
epithelial cell of proximal tubule
15
monocyte
13
glomerular endothelial cell
11
cardiomyocytes
11
islet of Langerhans
10
subcutaneous adipose tissue
9
EndoC_BH1
9
endothelial cell
9
extended pluripotent stem (EPS) cells
9
hepatocyte
9
induced pluripotent stem cell
9
progenitor cell of endocrine pancreas
8
H1-hESC
8
pancreatic ductal cell
7
T-helper 1 cell
7
T-helper 17 cell
7
kidney
7
kidney loop of Henle thin ascending limb epithelial cell
7
neural progenitor cell
7
regulatory T cell
6
body of pancreas
6
cerebellum
6
frontal cortex
6
kidney interstitial cell
6
omental fat pad
6
right atrium auricular region
6
tibial nerve
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
Ammon's horn
5
B Cell
5
C1 segment of cervical spinal cord
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
Glomerular Capillary Endothelial Cell
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
M2 Macrophage
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
T Cell
5
Transitional Principal-Intercalated Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
amygdala
5
anterior cingulate cortex
5
ascending aorta
5
caudate nucleus
5
cerebellum (Hemisphere)
5
coronary artery
5
gastrocnemius medialis(Muscle - Skeletal)
5
hypothalamus
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
left ventricle myocardium
5
nucleus accumbens
5
pancreatic acinar cell
5
pancreatic alpha cell
5
pancreatic beta cell
5
pancreatic delta cell
5
putamen
5
right lobe of liver
5
substantia nigra
5
tibial artery
4
bone tissue
4
cardiac precursors (cardiac muscle cell)
4
cardiomyocytes (cardiac muscle cell)
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
endothelial cell of hepatic sinusoid
4
gamma-delta T cell
4
glomerular visceral epithelial cell
4
kidney connecting tubule epithelial cell
4
kidney distal convoluted tubule epithelial cell
4
mesangial cell
4
nephron progenitor
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic endothelial cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
pancreatic stellate cell
3
CD8-positive, alpha-beta T cell
3
Cycling Mononuclear Phagocyte
3
Mast Cell
3
S-shaped body
3
T-helper 2 cell
3
adipose tissue
3
adult endothelial progenitor cell
3
central memory CD8-positive, alpha-beta T cell
3
effector memory CD8-positive, alpha-beta T cell
3
heart
3
hepatocyte(AFP)
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
memory B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
pancreatic quiescent stellate cell
3
visceral abdominal adipose tissue
2
B cell
2
Kupffer cell
2
T follicular helper cell
2
articular chondrocyte
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
kidney inner medulla collecting duct intercalated cell
2
liver
2
macrophage
2
mature natural killer cell
2
memory T cell
2
memory regulatory T cell
2
naive B cel
2
natural killer cell
2
osteoblast
2
renal vesicle
2
retina
2
vascular associated smooth muscle cell
1
B-1 B cell
1
B-1a B cell
1
B-2 B cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
Schwann cell
1
activated pancreatic stellate cell
1
adipocyte
1
adrenal gland
1
alpha-beta T cell
1
alternatively activated macrophage
1
aorta
1
aorta wall
1
aortic valve
1
astrocyte
1
bladder
1
brain
1
breast - mammary tissue
1
cardiac fibroblast
1
cardiac muscle cell (pacemaker cell)
1
cells - EBV-transformed lymphocytes
1
cells - cultured fibroblasts
1
central memory CD4-positive, alpha-beta T cell
1
cervix - ectocervix
1
cervix - endocervix
1
cholangiocyte
1
colon - sigmoid
1
colon - transverse
1
cytotoxic T cell
1
dendritic cell
1
diencephalon
1
dorsolateral prefrontal cortex
1
effector CD8-positive, alpha-beta T cell
1
effector memory CD4-positive, alpha-beta T cell
1
embryonic stem cell
1
epithelial cell of distal tubule
Disease term
1
Acute kidney failure, unspecified
1
Chronic kidney disease (CKD)
1
acute kidney failure
1
chronic kidney disease
Organ
5
epithelium
Life stage
6
adult
Date released
5
September, 2023
2
May, 2021
1
August, 2021
Software used
6
r
2
deseq2
1
seurat
Lab
5
KPMP
2
AMP-T2D consortium
1
Katalin Susztak, Upenn
Project
5
KPMP
3
AMP
RFA
5
KPMP
2
AMP
1
AMP2
annotation_type_category!
pCHi-C
Showing 8 of 8 results
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Download
FileSet
DSR388ACT
released
Annotation file set
: Differential activity annotation of Transitional Principal-Intercalated Cell between CKD and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP
FileSet
DSR613GKL
released
Annotation file set
: Differential activity annotation of Transitional Principal-Intercalated Cell between AKI and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP
FileSet
DSR389VHA
released
Annotation file set
: Gene expression annotation of Transitional Principal-Intercalated Cell of healthy individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR350HCL
released
Annotation file set
: Gene expression annotation of Transitional Principal-Intercalated Cell of CKD individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR835GOR
released
Annotation file set
: Gene expression annotation of Transitional Principal-Intercalated Cell of AKI individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR072FLD
released
Annotation file set
: GSE118165 gene expression annotation of normal CD8-positive, alpha-beta T cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR579KZW
released
Annotation file set
: GSE118165 gene expression annotation of LPS-stimulated CD8-positive, alpha-beta T cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR512ARP
released
Annotation file set
: Gene expression of kidney from Katalin Susztak FNIH Project scRNA-seq for CD8-positive, alpha-beta T cell
Lab:
Katalin Susztak, Upenn
Project:
AMP