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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
4
candidate regulatory elements
2
target gene predictions
1
chromatin state
Annotation Category
5
cis-regulatory elements
2
Target gene links
Annotation type Category
7
ChIP-seq
6
DNase-seq
Available data
7
bed bed3+
File set status
7
released
Genome assembly (visualization)
9
hg19
GRCh38
Organism
7
Homo sapiens
Biosample type
7
tissue
Biosample term
66
stomach
65
heart
56
kidney
51
brain
51
lung
50
muscle of arm
49
CD8-positive, alpha-beta T cell
47
adrenal gland
47
small intestine
45
placenta
44
A549
43
large intestine
42
muscle of leg
41
common myeloid progenitor, CD34-positive
41
muscle of back
39
left lung
38
liver
37
islet of Langerhans
37
thymus
34
retina
34
right lung
33
B cell
33
hematopoietic multipotent progenitor cell
31
monocyte
31
right kidney
30
renal cortex interstitium
30
renal pelvis
27
CD14-positive monocyte
27
left kidney
27
spinal cord
25
spleen
24
adipose tissue
24
neural progenitor cell
23
CD4-positive, alpha-beta memory T cell
23
adipocyte
23
regulatory T cell
22
EndoC_BH1
22
endothelial cell
21
MCF-7
20
breast cancer cell
20
epithelial cell of proximal tubule
20
heart left ventricle
20
pigmented layer of retina
19
K562
19
natural killer cell
19
pancreatic ductal cell
18
T-helper 1 cell
18
embryonic stem cell
18
foreskin keratinocyte
18
glomerular endothelial cell
18
hepatocyte
17
T-helper 17 cell
17
foreskin fibroblast
17
sigmoid colon
17
trophoblast cell
16
H1-hESC
16
induced pluripotent stem cell
16
ovary
15
CD8-positive, alpha-beta memory T cell
15
keratinocyte
15
mesenchymal stem cell
15
psoas muscle
14
body of pancreas
14
endothelial cell of umbilical vein
14
gastrocnemius medialis
14
mononuclear cell
14
pancreas
14
pancreatic alpha cell
14
transverse colon
13
CD4-positive, alpha-beta T cell
13
cardiac muscle cell
13
heart right ventricle
13
pancreatic beta cell
13
pancreatic delta cell
13
testis
13
thyroid gland
13
upper lobe of left lung
12
T cell
12
T-helper 2 cell
12
fibroblast of lung
12
layer of hippocampus
12
mammary epithelial cell
12
muscle of trunk
12
neuroblastoma cell
12
neutrophil
12
osteoblast
12
retinal pigment epithelial cell
12
skeletal muscle myoblast
12
skeletal muscle tissue
12
subcutaneous adipose tissue
12
tibial nerve
11
caudate nucleus
11
chorionic villus
11
macrophage
11
naive thymus-derived CD4-positive, alpha-beta T cell
10
HeLa-S3
10
Peyer's patch
10
Rhabdomyosarcoma
10
bronchial epithelial cell
10
endocrine pancreas
10
fibroblast of cardiac tissue
10
gastric cancer cell
10
mammary gland epithelial cell
10
neuronal stem cell
10
pancreatic acinar cell
10
progenitor cell of endocrine pancreas
10
prostate gland
10
smooth muscle cell
9
GM12878
9
H9
9
HepG2
9
cardiomyocytes
9
diffuse intrinsic pontine glioma
9
epithelial cell of prostate
9
fibroblast of dermis
9
liposarcoma
9
neurosphere
8
22Rv1
8
B-lymphoblastoid cell line
8
HEK293
8
aorta
8
breast epithelium
8
coronary artery
8
fibroblast
8
fibroblast cell line
8
left renal cortex interstitium
8
pituitary stalk
8
right renal pelvis
8
temporal lobe
8
trophoblast
7
GM12865
7
HT-29
7
cardiomyocytes (cardiac muscle cell)
7
colonic mucosa
7
esophageal adenocarcinoma
7
esophagus muscularis mucosa
7
esophagus squamous epithelium
7
extended pluripotent stem (EPS) cells
7
glomerular visceral epithelial cell
7
left renal pelvis
7
lower leg skin
7
mature neutrophil
7
mesendoderm
7
omental fat pad
7
right atrium auricular region
7
substantia nigra
7
tibial artery
6
AG04449 cell
6
AG04450 cell
6
AG09309 cell
6
AG09319 cell
6
AG10803 cell
6
Ammon's horn
6
BE(2)-C
6
BJ cell
6
CD1c-positive myeloid dendritic cell
6
CMK
6
Caco-2 cell
6
Chondroid Chordoma
6
GM06990
6
GM12864
6
HAP-1
6
IMR-90
6
Jurkat
6
LNCAP
6
NAMALWA cell
6
SK-N-MC
6
cardiac precursors (cardiac muscle cell)
6
chondrocyte
6
choroid plexus epithelial cell
6
cingulate gyrus
6
endometrium adenocarcinoma
6
esophagus
6
eye
6
fibroblast of pulmonary artery
6
hESC cell
6
immortal human breast epithelial cell line cell
6
naive thymus-derived CD8-positive, alpha-beta T cell
6
neuroblastoma cell line
6
pancreatic stellate cell
6
parathyroid adenoma
6
right renal cortex interstitium
6
skeletal muscle satellite cell
6
skin fibroblast
6
thoracic aorta
6
tongue
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
CD14-positive, CD16-negative classical monocyte
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
Organ
7
brain
Life stage
6
adult
Date released
4
September, 2022
2
February, 2021
1
August, 2017
Software used
4
r
2
encode-ccres
1
chromhmm
Lab
6
AMP-T2D consortium
1
Stephen Parker, UMich
Project
7
AMP
RFA
7
AMP
annotation_type_category!
quantitative proteomics
assembly!
GRCh38
month_released!
February, 2020
Showing 7 of 7 results
table-tab-icon
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Download
FileSet
DSR562BNB
released
Annotation file set
: Candidate regulatory elements for BSS00220 cingulate gyrus from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR737JUT
released
Annotation file set
: Candidate regulatory elements for BSS00219 cingulate gyrus from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR729BQB
released
Annotation file set
: Target gene predictions for BSS00220 cingulate gyrus from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR452VKD
released
Annotation file set
: Target gene predictions for BSS00219 cingulate gyrus from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR692EEZ
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE cingulate gyrus
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR031MJA
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE cingulate gyrus
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR903521
released
Annotation file set
: ChromHMM 13-state model for cingulate gyrus
Lab:
Stephen Parker, UMich
Project:
AMP