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Annotation type
5
caQTL
Annotation Category
5
Genetic variant effects
Annotation type Category
5
snATAC-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
5
primary cell
tissue
Biosample term
1
endothelial cell
1
mesenchymal stem cell
1
smooth muscle cell
1
type I muscle cell
1
type II muscle cell
Organ
2
musculature of body
1
connective tissue
1
epithelium
Date released
5
October, 2022
Software used
2232
macs
1354
r
524
chromhmm
360
encode-ccres
222
abc
117
deseq2
88
deltasvm
52
qTLtools
32
cicero
25
chicago
25
seurat
18
samtools
15
limix
12
deeptools
12
umitools
9
rasqual
9
salmon
6
hiccups
6
nospecificsoft_customcode
5
eigenmt
3
minfi
3
sqtlseeker
2
matrix-eQTL
2
mpraflow
1
altius-index
1
bedops
1
betacells_cytokines_t1d
1
cisgenome
1
e-range
1
pepatac
1
unknown
Lab
5
Stephen Parker, UMich
Project
5
AMP
RFA
5
AMP2
annotation_type_category!
quantitative proteomics
biosample_type!
tissue
organ_slims!
skeleton
Showing 5 of 5 results
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Download
FileSet
DSR273WHL
released
Annotation file set
: Chromatin site QTLs of type II muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR085VQO
released
Annotation file set
: Chromatin site QTLs of type I muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR375CST
released
Annotation file set
: Chromatin site QTLs of smooth muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR450DUL
released
Annotation file set
: Chromatin site QTLs of mesenchymal stem cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR259FVK
released
Annotation file set
: Chromatin site QTLs of endothelial cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP