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Schema
Citing CMDGA
Clear Filters
Annotation type
6
gene expression
2
differential activity
Annotation Category
8
Gene expression levels
Annotation type Category
5
single cell RNA-seq
3
snDropSeq
Available data
8
tsv
3
txt
bed bed3+
File set status
8
released
Organism
8
Homo sapiens
Biosample type
8
primary cell
Biosample term
28
islet of Langerhans
23
heart
23
kidney
21
brain
21
monocyte
21
stomach
18
A549
18
lung
17
liver
16
adrenal gland
16
epithelial cell of proximal tubule
16
induced pluripotent stem cell
16
muscle of arm
16
small intestine
15
glomerular endothelial cell
15
muscle of leg
15
placenta
14
subcutaneous adipose tissue
13
common myeloid progenitor, CD34-positive
13
large intestine
13
left lung
13
muscle of back
12
adipose tissue
12
hepatocyte
12
neural progenitor cell
12
regulatory T cell
11
EndoC_BH1
11
T-helper 1 cell
11
cardiomyocytes
11
hematopoietic multipotent progenitor cell
11
right kidney
11
right lung
11
thymus
11
tibial nerve
10
B cell
10
T-helper 17 cell
10
body of pancreas
10
caudate nucleus
10
heart left ventricle
9
CD4-positive, alpha-beta memory T cell
9
H1-hESC
9
cerebellum
9
coronary artery
9
extended pluripotent stem (EPS) cells
9
frontal cortex
9
left kidney
9
omental fat pad
9
progenitor cell of endocrine pancreas
9
putamen
9
renal cortex interstitium
9
renal pelvis
9
right atrium auricular region
9
substantia nigra
9
tibial artery
8
ascending aorta
8
spinal cord
8
spleen
7
CD8-positive, alpha-beta memory T cell
7
T-helper 2 cell
7
embryonic stem cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
macrophage
7
mature neutrophil
6
Ammon's horn
6
K562
6
T cell
6
amygdala
6
anterior cingulate cortex
6
hypothalamus
6
lymphoblastoid cell line
6
mononuclear cell
6
neutrophil
6
nucleus accumbens
6
ovary
6
right lobe of liver
6
skeletal muscle tissue
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
C1 segment of cervical spinal cord
5
CD14-positive, CD16-negative classical monocyte
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
Glomerular Capillary Endothelial Cell
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
M2 Macrophage
5
MCF-7
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
T Cell
5
Transitional Principal-Intercalated Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
cerebellum (Hemisphere)
5
endothelial cell of umbilical vein
5
gastrocnemius medialis(Muscle - Skeletal)
5
glomerular visceral epithelial cell
5
heart right ventricle
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
left ventricle myocardium
5
naive thymus-derived CD4-positive, alpha-beta T cell
5
retina
5
sigmoid colon
5
temporal lobe
5
testis
5
thyroid gland
5
transverse colon
5
trophoblast cell
4
CD14-positive monocyte
4
adipocyte
4
alternatively activated macrophage
4
angular gyrus
4
aorta
4
bone tissue
4
cardiac precursors (cardiac muscle cell)
4
chorionic villus
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
endocrine pancreas
4
endothelial cell
4
endothelial cell of hepatic sinusoid
4
foreskin keratinocyte
4
gastrocnemius medialis
4
layer of hippocampus
4
mesangial cell
4
mesenchymal stem cell
4
muscle of trunk
4
naive thymus-derived CD8-positive, alpha-beta T cell
4
natural killer cell
4
pancreatic ductal cell
4
psoas muscle
4
skeletal muscle myoblast
4
skeletal muscle satellite cell
4
skin of body
4
vagina
4
visceral abdominal adipose tissue
3
CD4-positive, alpha-beta T cell
3
CD8-positive, alpha-beta T cell
3
Cycling Mononuclear Phagocyte
3
HeLa-S3
3
Mast Cell
3
Peyer's patch
3
T follicular helper cell
3
adult endothelial progenitor cell
3
blood cell
3
cartilage tissue
3
central memory CD8-positive, alpha-beta T cell
3
chorion membrane
3
effector memory CD8-positive, alpha-beta T cell
3
endometrium adenocarcinoma
3
esophagus
3
esophagus muscularis mucosa
3
fibroblast of cardiac tissue
3
fibroblast of dermis
3
fibroblast of lung
3
hepatocyte(AFP)
3
immortal human breast epithelial cell line cell
3
inflammatory macrophage
3
kidney cell
Disease term
1
Acute kidney failure, unspecified
1
Chronic kidney disease (CKD)
1
acute kidney failure
1
chronic kidney disease
Organ
3
connective tissue
Life stage
8
adult
Date released
5
September, 2023
3
February, 2021
Software used
6
r
2
deseq2
Lab
5
KPMP
3
AMP-T2D consortium
Project
5
KPMP
3
AMP
RFA
5
KPMP
3
AMP
annotation_type_category!
scRNA-seq
files.file_type!
bed bed3+
Showing 8 of 8 results
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Download
FileSet
DSR422ZHZ
released
Annotation file set
: Differential activity annotation of Myofibroblast between CKD and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP
FileSet
DSR129ELE
released
Annotation file set
: Differential activity annotation of Myofibroblast between AKI and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP
FileSet
DSR634EBL
released
Annotation file set
: Gene expression annotation of Myofibroblast of healthy individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR547LVI
released
Annotation file set
: Gene expression annotation of Myofibroblast of CKD individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR997LQQ
released
Annotation file set
: Gene expression annotation of Myofibroblast of AKI individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR178POZ
released
Annotation file set
: Gene expression levels (pseudobulks UMI) of kidney Epithelial Cells (unassigned) from GSE121862 snDropSeq kidney regions (medulla)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR947DNI
released
Annotation file set
: Gene expression levels (pseudobulks UMI) of kidney Epithelial Cells (unassigned) from GSE121862 snDropSeq kidney regions (cortex)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR846HLK
released
Annotation file set
: Gene expression levels (pseudobulks UMI) of kidney Epithelial Cells (unassigned) from GSE121862 snDropSeq kidney regions (cortex and medulla)
Lab:
AMP-T2D consortium
Project:
AMP