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Citing CMDGA
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Annotation type
1
caQTL
Annotation Category
1
Genetic variant effects
Annotation type Category
snATAC-seq
1
ATAC-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
1
tissue
Biosample term
1
liver
Organ
1
liver
Date released
1
May, 2022
Software used
2280
r
1966
macs
827
encode-ccres
162
chromhmm
132
abc
116
deseq2
75
deltasvm
26
chicago
26
nospecificsoft_customcode
25
seurat
15
limix
12
deeptools
12
hiccups
12
samtools
12
umitools
8
qTLtools
6
fastqtl
5
matrix-eQTL
5
peer
5
unknown
3
mach2qtl
3
minfi
3
sqtlseeker
2
combined S2G strategy
2
emmax
2
mpraflow
1
altius-index
1
betacells_cytokines_t1d
1
bimbam
1
cisgenome
1
e-range
1
eigenmt
1
epacts
1
fast-lmm
1
haploview
1
probabel
1
rasqual
1
snap
Lab
1
Karen Mohlke, UNC
Project
1
AMP
RFA
1
AMP
annotation_type_category!
snATAC-seq
assembly!
GRCh38
organ_slims!
pancreas
Showing 1 of 1 results
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Download
FileSet
DSR797VBE
released
Annotation file set
: caQTL annotation of liver tissue from pilot study(AJHG2021) in Mohlke Lab
Lab:
Karen Mohlke, UNC
Project:
AMP