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Citing CMDGA
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Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
snATAC-seq
1
ATAC-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
109
monocyte
54
common myeloid progenitor, CD34-positive
44
CD8-positive, alpha-beta T cell
34
B cell
32
CD4-positive, alpha-beta memory T cell
31
CD14-positive monocyte
22
CD8-positive, alpha-beta memory T cell
20
mononuclear cell
19
endothelial cell of umbilical vein
19
foreskin keratinocyte
18
hepatocyte
18
trophoblast cell
17
regulatory T cell
16
fibroblast of lung
16
foreskin fibroblast
15
T-helper 1 cell
15
natural killer cell
15
osteoblast
14
CD4-positive, alpha-beta T cell
14
keratinocyte
14
neutrophil
14
skeletal muscle myoblast
13
T-helper 17 cell
13
T-helper 2 cell
13
mammary epithelial cell
13
neurosphere
12
T cell
12
bronchial epithelial cell
12
endothelial cell
12
fibroblast of dermis
12
pericyte cell
11
mammary gland epithelial cell
10
dermis blood vessel endothelial cell
10
endothelial cell of hepatic sinusoid
10
fibroblast of cardiac tissue
10
naive thymus-derived CD4-positive, alpha-beta T cell
9
astrocyte
9
epithelial cell of prostate
9
kidney tubule cell
9
mature neutrophil
9
naive T cell
9
retinal pigment epithelial cell
8
fibroblast of breast
8
fibroblast of mammary gland
8
fibroblast of pulmonary artery
8
fibroblast of villous mesenchyme
8
myoepithelial cell of mammary gland
8
skin fibroblast
8
smooth muscle cell
7
CD1c-positive myeloid dendritic cell
7
choroid plexus epithelial cell
7
epithelial cell of proximal tubule
7
pancreatic ductal cell
7
pulmonary artery endothelial cell
7
renal cortical epithelial cell
7
skeletal muscle satellite cell
6
T-cell
6
astrocyte of the cerebellum
6
astrocyte of the hippocampus
6
cardiac muscle cell
6
dermis lymphatic vessel endothelial cell
6
erythroblast
6
foreskin melanocyte
6
glomerular endothelial cell
6
glomerular visceral epithelial cell
6
glutamatergic neuron
6
hepatic stellate cell
6
kidney epithelial cell
6
kidney glomerular epithelial cell
6
olfactory receptor cell
6
peripheral blood mononuclear cell
6
skeletal muscle cell
6
smooth muscle cell of the brain vasculature
5
cardiac fibroblast
5
CD14-positive, CD16-negative classical monocyte
5
alternatively activated macrophage
5
brain microvascular endothelial cell
5
fibroblast
5
fibroblast of peridontal ligament
5
iris pigment epithelial cell
5
luminal epithelial cell of mammary gland
5
lung microvascular endothelial cell
5
non-pigmented ciliary epithelial cell
5
tracheal epithelial cell
4
acute myeloid leukemia cell
4
aortic adventitial fibroblast
4
aortic endothelial cell
4
astrocyte of the spinal cord
4
cardiac fibroblast
4
epithelial cell of esophagus
4
fibroblast of gingiva
4
fibroblast of the aortic adventitia
4
fibroblast of the conjunctiva
4
inflammatory macrophage
4
kidney capillary endothelial cell
4
mesenchymal stem cell
4
plasma cell
4
preadipocyte
4
renal epithelial cell
4
stromal cell of bone marrow
3
CD4-positive helper T cell
3
Ishikawa
3
Th1 cell
3
Th17 cell
3
amnion mesenchymal stem cell
3
amniotic stem cell
3
bone marrow cell
3
brain pericyte
3
colon epithelial cell
3
epidermal melanocyte
3
epithelial cell of amnion
3
erythroid cell
3
gabaergic neuron
3
mammary stem cell
3
mast cell
3
memory B cell
3
mononuclear cell of bone marrow
3
myotube
3
naive B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
neoplastic cell
3
pancreatic A cell
3
pancreatic acinar cell
3
peripheral blood stem cell
3
pre-B acute lymphoblastic leukemia cell
3
pulmonary interstitial fibroblast
3
regular cardiac myocyte
3
type B pancreatic cell
3
type I muscle cell
3
type II muscle cell
2
Adipose stromal cell
2
B-lymphocyte
2
CD34-positive, CD38-negative hematopoietic stem cell
2
Rhabdoid Tumor of the Kidney
2
T follicular helper cell
2
Th2 cell
2
blood vessel smooth muscle cell
2
cardiac muscle myoblast
2
central memory CD8-positive, alpha-beta T cell
2
chronic lymphocytic leukemia cell
2
columnar chondrocyte
2
cortical cell of adrenal gland
2
dermis microvascular lymphatic vessel endothelial cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
enteric smooth muscle cell
2
erythroid progenitor cell
2
gamma-delta T cell
2
head and neck squamous cell carcinoma
2
leukemic stem cell
2
macrophage
2
mantle cell lymphoma cell
2
mature natural killer cell
2
memory T cell
2
memory regulatory T cell
2
meso-epithelial cell
2
naive regulatory T cell
2
naive t cell
2
neuronal stem cell
2
oligodendrocyte
2
pancreatic beta cell
2
peripheral blood-derived erythroblast
2
primordial germ cell
2
prostate gland cancer cell
2
renal proximal tubule cell
2
skeletal muscle fiber
2
small cell ovarian carcinoma cell
2
smooth muscle cell of the esophagus
2
somatic muscle myotube
2
type II pneumocyte
1
brain microvascular endothelial cell
1
retinal pigment epithelial cell
1
B cell, CD19-positive
1
B-Lymphocytes
1
B-cell lymphoma cell
1
CD34-PB
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD34-positive, CD38-positive common myeloid progenitor OR CD34-positive, CD38-positive common lymphoid progenitor
1
CD4-Positive T-Lymphocytes
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
CD56-positive, CD161-positive immature natural killer cell
1
Glioblastoma
1
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
Stromal Predominant Kidney Wilms Tumor
1
T-cell lymphoma cell
1
activated CD4-positive, alpha-beta T cell
1
acute myeloid leukemia
1
adipocyte
1
adult endothelial progenitor cell
1
alveolar cell type II
1
alveolar macrophage
1
amniotic epithelial cell
1
aortic smooth muscle cell
1
basal cell
1
basal cell of epidermis
1
bone cell
1
cardiac endothelial cell
1
ciliated cell
Organ
1
epithelium
1
lymphatic vessel
1
vasculature
Date released
1
November, 2021
Software used
1
abc
Lab
1
Bing Ren, UCSD
Project
1
ENCODE
RFA
1
ENCODE3
annotation_type_category!
snATAC-seq
biosample_term_name!
Peritubular Capillary Endothelial Cell
Showing 1 of 1 results
table-tab-icon
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Download
FileSet
DSR451QZS
released
Annotation file set
: Target gene predictions of Lymphatic Endothelial Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE