Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
gene expression
2
differential activity
Annotation Category
5
Gene expression levels
Annotation type Category
5
single cell RNA-seq
Available data
5
tsv
File set status
5
released
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
129
monocyte
64
HeLa-S3
62
A549
54
H1-hESC
54
common myeloid progenitor, CD34-positive
51
neural progenitor cell
48
CD8-positive, alpha-beta T cell
43
hematopoietic multipotent progenitor cell
41
K562
40
B cell
35
hepatocyte
32
CD4-positive, alpha-beta memory T cell
31
CD14-positive monocyte
26
MCF-7
26
regulatory T cell
23
EndoC_BH1
23
T-helper 1 cell
23
epithelial cell of proximal tubule
23
trophoblast cell
22
CD8-positive, alpha-beta memory T cell
22
adipocyte
21
T-helper 17 cell
21
endothelial cell
21
glomerular endothelial cell
20
breast cancer cell
20
mononuclear cell
20
natural killer cell
19
HFFc6
19
endothelial cell of umbilical vein
18
embryonic stem cell
18
keratinocyte
17
HepG2
17
T-helper 2 cell
17
osteoblast
17
pancreatic ductal cell
16
GM12878
16
H9
16
cardiac muscle cell
16
fibroblast of lung
16
induced pluripotent stem cell
16
mesenchymal stem cell
16
skeletal muscle myoblast
15
macrophage
15
neutrophil
15
retinal pigment epithelial cell
14
CD4-positive, alpha-beta T cell
14
T cell
14
endothelial cell of hepatic sinusoid
14
fibroblast of cardiac tissue
14
mammary gland epithelial cell
13
bronchial epithelial cell
13
neurosphere
12
fibroblast of dermis
12
lymphoblastoid cell line
12
mammary epithelial cell
12
neuroblastoma cell
11
epithelial cell of prostate
11
glomerular visceral epithelial cell
11
naive thymus-derived CD4-positive, alpha-beta T cell
11
smooth muscle cell
10
22Rv1
10
Rhabdomyosarcoma
10
choroid plexus epithelial cell
10
gastric cancer cell
10
kidney tubule cell
10
lymphocyte
10
neuronal stem cell
10
progenitor cell of endocrine pancreas
9
HEK293
9
IMR-90
9
SK-N-DZ
9
SK-N-SH
9
cardiomyocytes
9
diffuse intrinsic pontine glioma
9
hepatic stellate cell
9
liposarcoma
9
pericyte cell
9
skin fibroblast
8
B-lymphoblastoid cell line
8
GM06990
8
GM12864
8
GM12865
8
GM19240
8
HAP-1
8
HL-60
8
HT-29
8
MM.1S
8
NAMALWA cell
8
astrocyte
8
dermis blood vessel endothelial cell
8
endodermal cell
8
fibroblast cell line
8
immortal human breast epithelial cell line cell
8
mesendoderm
8
myoepithelial cell of mammary gland
8
naive T cell
8
pancreatic acinar cell
8
pituitary stalk
8
skeletal muscle satellite cell
7
AG04449 cell
7
AG04450 cell
7
AG09309 cell
7
AG09319 cell
7
AG10803 cell
7
BE(2)-C
7
BJ cell
7
CD1c-positive myeloid dendritic cell
7
CD4-positive helper T cell
7
CMK
7
Caco-2 cell
7
GM12875
7
GM19238
7
GM19239
7
GM23248
7
Jurkat
7
KARPAS-422 cell
7
LNCaP clone FGC
7
LoVo cell
7
SK-N-MC
7
T47D
7
WERI-Rb-1
7
cardiomyocytes (cardiac muscle cell)
7
dermis lymphatic vessel endothelial cell
7
endometrium adenocarcinoma
7
esophageal adenocarcinoma
7
extended pluripotent stem (EPS) cells
7
fibroblast of pulmonary artery
7
kidney glomerular epithelial cell
7
mature neutrophil
7
pancreatic beta cell
7
renal cortical epithelial cell
6
Chondroid Chordoma
6
Daoy
6
GM08714
6
GM10248
6
GM10266
6
GM12891
6
GM12892
6
GM18507
6
H7-hESC
6
HCT116
6
HUES6
6
HUES8
6
HuH-7
6
LHCN-M2
6
LNCAP
6
MG63
6
OCI-LY7
6
PC-9
6
SJSA1
6
SW480
6
WI38
6
cardiac precursors (cardiac muscle cell)
6
chondrocyte
6
fibroblast
6
fibroblast of breast
6
fibroblast of mammary gland
6
fibroblast of villous mesenchyme
6
hESC cell
6
iPSC derived cell line
6
mesodermal cell
6
neuroblastoma cell line
6
pancreatic alpha cell
5
cardiac fibroblast
5
A172
5
A673
5
ACHN
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
CD14-positive, CD16-negative classical monocyte
5
Caki2
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
CyT49
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Ewing sarcoma
5
Fibroblast
5
GM04503
Disease term
1
Acute kidney failure, unspecified
1
Chronic kidney disease (CKD)
1
acute kidney failure
1
chronic kidney disease
Organ
5
epithelium
5
kidney
Life stage
5
adult
Date released
5
September, 2023
Software used
3
r
2
deseq2
Lab
5
KPMP
Project
5
KPMP
RFA
5
KPMP
annotation_type_category!
snATAC-seq
biosample_type!
tissue
organ_slims!
penis
Showing 5 of 5 results
table-tab-icon
matrix-icon
Download
FileSet
DSR316NWY
released
Annotation file set
: Differential activity annotation of Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1 between CKD and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP
FileSet
DSR207ODY
released
Annotation file set
: Differential activity annotation of Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1 between AKI and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP
FileSet
DSR153SYW
released
Annotation file set
: Gene expression annotation of Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1 of healthy individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR374HTH
released
Annotation file set
: Gene expression annotation of Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1 of CKD individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR090HCJ
released
Annotation file set
: Gene expression annotation of Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1 of AKI individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP