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Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
ATAC-seq
snATAC-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
128
monocyte
47
CD8-positive, alpha-beta T cell
28
hepatocyte
20
endothelial cell
20
epithelial cell of proximal tubule
19
CD14-positive monocyte
18
glomerular endothelial cell
17
regulatory T cell
15
common myeloid progenitor, CD34-positive
14
CD4-positive, alpha-beta T cell
14
T-helper 1 cell
14
endothelial cell of hepatic sinusoid
14
endothelial cell of umbilical vein
14
osteoblast
13
foreskin fibroblast
13
mammary epithelial cell
13
pancreatic ductal cell
12
B cell
12
T-helper 17 cell
12
naive thymus-derived CD4-positive, alpha-beta T cell
11
macrophage
10
skeletal muscle myoblast
9
mature neutrophil
9
natural killer cell
9
neutrophil
9
pancreatic acinar cell
9
pericyte cell
8
T-helper 2 cell
8
glomerular visceral epithelial cell
8
keratinocyte
8
pancreatic beta cell
8
smooth muscle cell
7
astrocyte
7
fibroblast
7
fibroblast of lung
7
foreskin keratinocyte
7
kidney interstitial cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
naive thymus-derived CD8-positive, alpha-beta T cell
7
pancreatic alpha cell
7
pancreatic delta cell
6
T-cell
6
alternatively activated macrophage
6
bronchial epithelial cell
6
cardiac muscle cell
6
erythroblast
6
gamma-delta T cell
6
glutamatergic neuron
6
memory B cell
6
olfactory receptor cell
6
peripheral blood mononuclear cell
6
retinal pigment epithelial cell
6
trophoblast cell
5
cardiac fibroblast
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
CD14-positive, CD16-negative classical monocyte
5
CD4-positive helper T cell
5
CD4-positive, alpha-beta memory T cell
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
Glomerular Capillary Endothelial Cell
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
M2 Macrophage
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
T Cell
5
T follicular helper cell
5
Transitional Principal-Intercalated Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
central memory CD8-positive, alpha-beta T cell
5
effector memory CD8-positive, alpha-beta T cell
5
fibroblast of mammary gland
5
fibroblast of pulmonary artery
5
fibroblast of villous mesenchyme
5
hepatic stellate cell
5
inflammatory macrophage
5
kidney cortex collecting duct principal cell
5
kidney glomerular epithelial cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
mesangial cell
5
pancreatic stellate cell
5
plasma cell
5
renal cortical epithelial cell
5
skeletal muscle satellite cell
5
tracheal epithelial cell
4
CD1c-positive myeloid dendritic cell
4
acute myeloid leukemia cell
4
adult endothelial progenitor cell
4
aortic adventitial fibroblast
4
cardiac fibroblast
4
choroid plexus epithelial cell
4
dermis blood vessel endothelial cell
4
effector CD4-positive, alpha-beta T cell
4
effector T cell
4
kidney connecting tubule epithelial cell
4
kidney distal convoluted tubule epithelial cell
4
kidney epithelial cell
4
kidney tubule cell
4
mast cell
4
mature natural killer cell
4
memory T cell
4
memory regulatory T cell
4
mesenchymal stem cell
4
naive B cell
4
nephron progenitor
4
neurosphere
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic endothelial cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
preadipocyte
4
pulmonary artery endothelial cell
4
renal epithelial cell
3
Cycling Mononuclear Phagocyte
3
Ishikawa
3
Mast Cell
3
S-shaped body
3
Th1 cell
3
Th17 cell
3
astrocyte of the cerebellum
3
astrocyte of the hippocampus
3
blood cell
3
bone marrow cell
3
brain pericyte
3
colon epithelial cell
3
epithelial cell of prostate
3
erythroid cell
3
fibroblast of dermis
3
foreskin melanocyte
3
gabaergic neuron
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
meso-epithelial cell
3
mononuclear cell of bone marrow
3
myotube
3
naive B cel
3
naive regulatory T cell
3
neoplastic cell
3
pancreatic A cell
3
pancreatic quiescent stellate cell
3
peripheral blood stem cell
3
pre-B acute lymphoblastic leukemia cell
3
pulmonary interstitial fibroblast
3
skeletal muscle cell
3
smooth muscle cell of the brain vasculature
3
type B pancreatic cell
3
type I muscle cell
3
type II muscle cell
2
Adipose stromal cell
Organ
1
epithelium
Date released
1
November, 2021
Software used
1
abc
Lab
1
Bing Ren, UCSD
Project
1
ENCODE
RFA
1
ENCODE3
annotation_type_category!
snATAC-seq
biosample_term_name!
enterocyte
month_released!
September, 2022
Showing 1 of 1 results
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Download
FileSet
DSR770VNH
released
Annotation file set
: Target gene predictions of Eccrine Epidermal (Skin) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE