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Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
1
variant allelic effects
Annotation Category
2
cis-regulatory elements
1
Genetic variant effects
Annotation type Category
15
RNA-seq
3
ATAC-seq
3
ChIP-seq
2
DNase-seq
1
RNA microarray
Available data
3
bed bed3+
2
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
9
pericyte cell
7
adipocyte
5
chondrocyte
4
adipose tissue
4
fibroblast
3
osteoblast
3
subcutaneous adipose tissue
1
Adipose SGBS cell line (adipocyte)
1
Preadipose SGBS cell line (adipocyte)
1
SGBS preadipocytes
1
beige adipocyte
1
fat cell
1
fibroblast of arm
1
fibroblast of cardiac tissue
1
fibroblast of dermis
1
fibroblast of lung
1
foreskin fibroblast
1
luteal cell
1
mesenchymal stem cell
1
omental fat pad
1
preadipocyte
1
skin fibroblast
1
stromal cell
1
white adipose tissue
Organ
3
adipose tissue
3
connective tissue
Life stage
1
adult
Date released
1
January, 2020
1
May, 2020
1
September, 2018
Software used
2
macs
1
deltasvm
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
annotation_type_category!
Expression arrays
Showing 3 of 3 results
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Download
FileSet
DSR802UOO
released
Annotation file set
: Genetic variants with deltaSVM predictions in adipose white tissue ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR687BVG
released
Annotation file set
: Accessible chromatin annotation of adipose white tissue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR978YHK
released
Annotation file set
: ATAC-seq sites in subcutaneous adipose tissue for 1 sample from ENCODE
Lab:
AMP-T2D consortium
Project:
AMP