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Citing CMDGA
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Annotation type
2
target gene predictions
Annotation Category
2
Target gene links
Annotation type Category
16
ChIP-seq
14
DNase-seq
2
ATAC-seq
2
RNA-seq
2
snATAC-seq
1
H3K27ac ChIP-Seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
1
primary cell
1
tissue
Biosample term
1
thyroid follicular cell
1
thyroid gland
Organ
119
epithelium
52
connective tissue
47
eye
35
pancreas
19
liver
19
vasculature
18
blood vessel
17
heart
15
kidney
14
intestine
12
brain
12
limb
11
artery
10
adipose tissue
10
pituitary gland
10
skin of body
9
musculature of body
8
large intestine
7
bone element
7
lung
7
skeleton
6
adrenal gland
6
stomach
5
embryo
5
mammary gland
4
blood
4
bodily fluid
3
extraembryonic component
3
small intestine
3
uterus
2
esophagus
2
gonad
2
nerve
2
ovary
2
prostate gland
2
spleen
2
thyroid gland
1
breast
1
bronchus
1
lymph node
1
lymphatic vessel
1
penis
1
placenta
spinal cord
1
thymus
1
vein
Date released
1
May, 2021
1
November, 2021
Software used
2
abc
Lab
1
Bing Ren, UCSD
1
Jesse Engreitz, Stanford University
Project
1
AMP
1
ENCODE
RFA
1
AMP
1
ENCODE3
biosample_term_name!
breast cancer cell
organ_slims!
spinal cord
Showing 2 of 2 results
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Download
FileSet
DSR121IWB
released
Annotation file set
: Target gene predictions of Thyroid Follicular Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR632XJX
released
Annotation file set
: enhancer-gene predicton of thyroid_gland-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP