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Schema
Citing CMDGA
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Annotation type
1
accessible chromatin
Annotation Category
1
cis-regulatory elements
Annotation type Category
61
ChIP-seq
40
DNase-seq
7
snATAC-seq
6
scRNA-seq
1
ATAC-seq
Available data
1
bed bed3+
1
bigWig
File set status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
21
retina
20
pigmented layer of retina
15
monocyte
10
neural progenitor cell
9
EndoC_BH1
7
kidney
6
embryonic stem cell
6
islet of Langerhans
6
retinal pigment epithelial cell
5
SGBS preadipocytes
5
chondrocyte
5
hepatocyte
4
coronary artery
4
endothelial cell of hepatic sinusoid
4
glutamatergic neuron
4
liver
3
CD4-positive helper T cell
3
Pancreatic progenitors (progenitor cell of endocrine pancreas)
3
adipocyte
3
adipose tissue
3
subcutaneous adipose tissue
2
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
T-helper 2 cell
2
adipose-derived stem cell
2
aortic endothelial cell
2
central memory CD8-positive, alpha-beta T cell
2
differentiating adipose-derived stem cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
gamma-delta T cell
2
heart left ventricle
2
mature natural killer cell
2
memory B cell
2
memory T cell
2
memory regulatory T cell
2
naive B cell
2
naive regulatory T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
osteoblast
2
pancreatic beta cell
2
regulatory T cell
2
right atrium auricular region
2
thoracic aorta
2
tibial artery
2
tibial nerve
1
Adipose SGBS cell line (adipocyte)
1
Heart fetal (cardiac muscle cell)
1
HepG2
1
Liver fetal (hepatocyte)
1
Preadipose SGBS cell line (adipocyte)
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
astrocyte
1
cardiac muscle cell
1
cardiac precursors
1
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
endothelial cell
1
excitatory neuron
1
gabaergic neuron
1
glomerular visceral epithelial cell
1
heart
1
hippocampal neuron
1
immature natural killer cell
1
kidney glomerular epithelial cell
1
kidney interstitial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
lower motor neuron
1
microglial cell/astrocyte
1
myeloid dendritic cell
1
natural killer cell
1
neuron
1
neuron cell of Hypothalamus (neuron)
1
non-neuronal cell
1
oligodendrocyte
1
omental fat pad
1
pancreas
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic ductal cell
1
plasma cell
1
plasmacytoid dendritic cell
1
preadipocyte
1
proximal epiphysis
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
renal intercalated cell
1
renal principal cell
1
smooth muscle cell of the coronary artery
1
spleen
0
A549
Organ
1
epithelium
1
pancreas
Date released
1
October, 2019
Software used
abc
1
macs
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
software_used.software.name!
abc
Showing 1 of 1 results
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Download
FileSet
DSR639GZY
released
Annotation file set
: Pancreatic acinar cell accessible chromatin annotation of overlapping ATAC-seq sites from 4 samples with most significant peak selected
Lab:
AMP-T2D consortium
Project:
AMP