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Citing CMDGA
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Annotation type
1
accessible chromatin
1
target gene predictions
Annotation Category
1
Target gene links
1
cis-regulatory elements
Annotation type Category
6
DNase-seq
4
ChIP-seq
3
snDropSeq
2
ATAC-seq
1
RNA-seq
1
scRNA-seq
1
snATAC-seq
Available data
2
bed bed3+
1
bigWig
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
20
pigmented layer of retina
9
EndoC_BH1
7
endothelial cell
7
hepatocyte
6
retinal pigment epithelial cell
4
endothelial cell of hepatic sinusoid
3
colon epithelial cell
3
pancreatic A cell
3
pancreatic acinar cell
3
pancreatic ductal cell
3
type B pancreatic cell
2
aortic endothelial cell
2
cortical cell of adrenal gland
2
luminal epithelial cell of mammary gland
2
pancreatic beta cell
2
type II pneumocyte
1
Liver fetal (hepatocyte)
1
breast epithelium
1
cardiac endothelial cell
1
club cell
1
eccrine cell
1
endocardial cell
1
endothelial cell of lymphatic vessel
1
endothelial cell of umbilical vein
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
epithelial cell of prostate
1
foveolar cell of stomach
1
glomerular visceral epithelial cell
1
kidney glomerular epithelial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
mammary epithelial cell
1
mammary gland epithelial cell
1
mesothelial cell
1
myoepithelial cell
1
non keratinizing barrier epithelial cell
1
pancreatic alpha cell
1
pancreatic delta cell
1
paneth cell
1
parietal cell
1
peptic cell
1
renal intercalated cell
1
renal principal cell
1
respiratory goblet cell
1
small intestine goblet cell
1
stomach neuroendocrine cell
1
thyroid follicular cell
1
type I cell of adrenal cortex
1
type I pneumocyte
1
type II cell of adrenal cortex
Organ
2
epithelium
1
adrenal gland
1
kidney
Life stage
1
adult
Date released
1
August, 2021
1
November, 2021
Software used
1
abc
1
macs
Lab
1
Bing Ren, UCSD
1
Katalin Susztak, Upenn
Project
1
AMP
1
ENCODE
RFA
1
AMP2
1
ENCODE3
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Showing 2 of 2 results
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Download
FileSet
DSR085EEN
released
Annotation file set
: Target gene predictions of Zona Fasciculata Cortical Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR884VIR
released
Annotation file set
: Accessible chromatin from Katalin Susztak 75kidney Project of Podocytes
Lab:
Katalin Susztak, Upenn
Project:
AMP